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Aliases for LOC101928436 Gene

Aliases for LOC101928436 Gene

  • Uncharacterized LOC101928436 3
  • AC095032.1 5

External Ids for LOC101928436 Gene

Previous GeneCards Identifiers for LOC101928436 Gene

  • GC01U903960
  • GC01M103961

Summaries for LOC101928436 Gene

GeneCards Summary for LOC101928436 Gene

LOC101928436 (Uncharacterized LOC101928436) is a Protein Coding gene.

Additional gene information for LOC101928436 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101928436 Gene

Genomics for LOC101928436 Gene

Regulatory Elements for LOC101928436 Gene

Enhancers for LOC101928436 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H103561 0.8 Ensembl ENCODE 12.3 -36.4 -36419 1 FOXA2 RBBP5 HNF4A ZBTB33 RUNX3 FOXA1 AMY2B RN7SKP285 RNPC3 LOC101928436 ACTG1P4
GH01H103562 0.2 Ensembl 12.3 -37.4 -37418 0 RNPC3 RN7SKP285 LOC101928436 ACTG1P4 AMY2B
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC101928436 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC101928436 Gene

Chromosome:
1
Start:
103,418,079 bp from pter
End:
103,525,483 bp from pter
Size:
107,405 bases
Orientation:
Minus strand

Genomic View for LOC101928436 Gene

Genes around LOC101928436 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928436 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928436 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928436 Gene

Proteins for LOC101928436 Gene

Post-translational modifications for LOC101928436 Gene

No Post-translational modifications

Other Protein References for LOC101928436 Gene

No data available for DME Specific Peptides for LOC101928436 Gene

Domains & Families for LOC101928436 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101928436 Gene

Function for LOC101928436 Gene

Phenotypes From GWAS Catalog for LOC101928436 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928436 Gene

Localization for LOC101928436 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928436 Gene

Pathways & Interactions for LOC101928436 Gene

SuperPathways for LOC101928436 Gene

No Data Available

Interacting Proteins for LOC101928436 Gene

Gene Ontology (GO) - Biological Process for LOC101928436 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928436 Gene

Drugs & Compounds for LOC101928436 Gene

No Compound Related Data Available

Transcripts for LOC101928436 Gene

mRNA/cDNA for LOC101928436 Gene

(3) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928436 Gene

No ASD Table

Relevant External Links for LOC101928436 Gene

GeneLoc Exon Structure for
LOC101928436

Expression for LOC101928436 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101928436 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101928436 Gene

This gene is overexpressed in Testis (x10.9), Brain - Anterior cingulate cortex (BA24) (x7.5), Brain - Frontal Cortex (BA9) (x4.6), and Brain - Cortex (x4.5).
genes like me logo Genes that share expression patterns with LOC101928436: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928436 Gene

Orthologs for LOC101928436 Gene

Evolution for LOC101928436 Gene

ENSEMBL:
Gene Tree for LOC101928436 (if available)
TreeFam:
Gene Tree for LOC101928436 (if available)

No data available for Orthologs for LOC101928436 Gene

Paralogs for LOC101928436 Gene

No data available for Paralogs for LOC101928436 Gene

Variants for LOC101928436 Gene

Sequence variations from dbSNP and Humsavar for LOC101928436 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000006704 -- 103,427,105(+) GAACC(A/G)TAAGC intron-variant
rs1000008703 -- 103,496,208(+) AACTA(C/T)CAACA intron-variant
rs1000083012 -- 103,468,028(+) AGAAA(C/T)AGAAA intron-variant
rs1000110097 -- 103,433,894(+) CCCAC(C/T)GCCAA intron-variant
rs1000124610 -- 103,493,690(+) TCATC(A/G)CCAGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101928436 Gene

Variant ID Type Subtype PubMed ID
dgv133n106 CNV deletion 24896259
dgv14n21 CNV gain 19592680
dgv213n100 CNV gain 25217958
dgv390n54 CNV loss 21841781
dgv391n54 CNV loss 21841781
esv27438 CNV gain 19812545
esv2758954 CNV gain+loss 17122850
esv3052678 CNV deletion 24192839
esv3583026 CNV gain 25503493
esv3587011 CNV loss 21293372
nsv1078597 CNV deletion 25765185
nsv428157 CNV gain+loss 18775914
nsv523177 CNV gain 19592680
nsv526367 CNV gain 19592680
nsv546939 CNV loss 21841781
nsv546940 CNV loss 21841781
nsv546944 CNV loss 21841781
nsv830904 CNV loss 17160897
nsv830915 CNV gain+loss 17160897
nsv950525 CNV deletion 24416366

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for LOC101928436 Gene

Disorders for LOC101928436 Gene

Relevant External Links for LOC101928436

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC101928436

No disorders were found for LOC101928436 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101928436 Gene

Publications for LOC101928436 Gene

  1. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie AG … Butte NF (PloS one 2012) 3 60

Products for LOC101928436 Gene

Sources for LOC101928436 Gene

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