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Aliases for LOC101928335 Gene

Subcategory (RNA class) for LOC101928335 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101928335 Gene

  • Uncharacterized LOC101928335 3
  • AL034399.2 5

External Ids for LOC101928335 Gene

Previous GeneCards Identifiers for LOC101928335 Gene

  • GC0XU901877

Summaries for LOC101928335 Gene

GeneCards Summary for LOC101928335 Gene

LOC101928335 (Uncharacterized LOC101928335) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101928335 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101928335 Gene

Genomics for LOC101928335 Gene

GeneHancer (GH) Regulatory Elements for LOC101928335 Gene

Promoters and enhancers for LOC101928335 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI107935 Promoter/Enhancer 1 Ensembl ENCODE 550.8 +0.1 79 0.6 KLF1 POLR2A GLIS1 EZH2 LOC101928335 GC0XM107902 ENSG00000207363
GH0XI107708 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 4.5 +221.7 221668 10.9 HDGF PKNOX1 SMAD1 ARNT SIN3A YBX1 YY1 ZNF143 FOS JUNB TSC22D3 RBM41 MORC4 MID2 LOC101928335 ATG4A GC0XM107728 GC0XM107676
GH0XI107825 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE 4.4 +109.5 109515 2.7 PKNOX1 ARNT ZSCAN4 MZF1 SIN3A FEZF1 ZNF335 ZNF213 ZNF366 SP3 MID2 RBM41 NCBP2L LOC101928335 GC0XM107885
GH0XI107766 Enhancer 0.8 ENCODE dbSUPER 4.4 +168.9 168939 1.1 SREBF1 ZNF687 SMARCC1 GLIS1 SMARCC2 CEBPB FOS ZIC2 RFX5 LOC101928335 NCBP2L TSC22D3 GC0XM107728
GH0XI107928 Enhancer 0.2 ENCODE 0.4 +6.9 6930 0.9 LOC101928335 ENSG00000207363 GC0XM107902 MID2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101928335 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928335 Gene

Genomic Locations for LOC101928335 Gene
chrX:107,894,597-107,935,980
(GRCh38/hg38)
Size:
41,384 bases
Orientation:
Minus strand
chrX:107,137,827-107,179,210
(GRCh37/hg19)

Genomic View for LOC101928335 Gene

Genes around LOC101928335 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928335 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928335 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928335 Gene

Proteins for LOC101928335 Gene

Post-translational modifications for LOC101928335 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928335 Gene

Domains & Families for LOC101928335 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101928335 Gene

Function for LOC101928335 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928335 Gene

Localization for LOC101928335 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928335 Gene

Pathways & Interactions for LOC101928335 Gene

SuperPathways for LOC101928335 Gene

No Data Available

Interacting Proteins for LOC101928335 Gene

Gene Ontology (GO) - Biological Process for LOC101928335 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928335 Gene

Drugs & Compounds for LOC101928335 Gene

No Compound Related Data Available

Transcripts for LOC101928335 Gene

mRNA/cDNA for LOC101928335 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928335 Gene

No ASD Table

Relevant External Links for LOC101928335 Gene

GeneLoc Exon Structure for
LOC101928335

Expression for LOC101928335 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101928335 Gene

genes like me logo Genes that share expression patterns with LOC101928335: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928335 Gene

Orthologs for LOC101928335 Gene

Evolution for LOC101928335 Gene

ENSEMBL:
Gene Tree for LOC101928335 (if available)
TreeFam:
Gene Tree for LOC101928335 (if available)

No data available for Orthologs for LOC101928335 Gene

Paralogs for LOC101928335 Gene

No data available for Paralogs for LOC101928335 Gene

Variants for LOC101928335 Gene

Sequence variations from dbSNP and Humsavar for LOC101928335 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs587777605 pathogenic, Mental retardation, X-linked 101 107,905,593(-) G/A intron_variant
rs758037994 likely-benign, not provided 107,915,994(-) TTTTT/TTTT intron_variant
rs534271877 likely-benign, not specified 107,917,732(-) G/A intron_variant
rs150716868 uncertain-significance, not specified 107,926,152(-) T/C intron_variant
rs370198556 uncertain-significance, not specified 107,927,009(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928335 Gene

Disorders for LOC101928335 Gene

Additional Disease Information for LOC101928335

No disorders were found for LOC101928335 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101928335 Gene

Publications for LOC101928335 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for LOC101928335 Gene

Sources for LOC101928335 Gene

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