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Aliases for LOC101928266 Gene

Subcategory (RNA class) for LOC101928266 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101928266 Gene

  • Uncharacterized LOC101928266 3
  • AC005695.1 5

External Ids for LOC101928266 Gene

Previous GeneCards Identifiers for LOC101928266 Gene

  • GC17U901937

Summaries for LOC101928266 Gene

GeneCards Summary for LOC101928266 Gene

LOC101928266 (Uncharacterized LOC101928266) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101928266 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101928266 Gene

Genomics for LOC101928266 Gene

Regulatory Elements for LOC101928266 Gene

Enhancers for LOC101928266 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H009183 0.6 dbSUPER 6 -6.5 -6465 3.9 ZFHX2 GLIS1 MAX ZIC2 MYC ZNF112 LOC101928266 GC17M009219
GH17H009173 0.6 dbSUPER 0.7 +4.7 4709 2.6 ZNF157 ZNF184 MAX HNF4A ZNF548 RAD21 PFAS CTC1 ENSG00000265749 PIR43665 LOC101928266
GH17H009195 1 ENCODE dbSUPER 0.4 -17.8 -17828 2.3 PKNOX1 ESRRA ZIC2 CTBP1 POLR2A FOS RCOR1 SMARCE1 MAZ ZNF687 LOC101928266 GC17M009219
GH17H009216 1.1 Ensembl ENCODE dbSUPER 0.3 -38.4 -38420 2 ESRRA ZNF362 ZNF384 ATF2 ZEB1 ZNF629 FOS PRDM1 TRIM28 GC17M009219 LOC101928266
GH17H009199 1 ENCODE dbSUPER 0.3 -21.3 -21282 2.8 HDGF PKNOX1 MAX EBF1 ZIC2 ETS1 RBAK ZNF143 ZNF207 ATF7 PFAS GC17M009219 LOC101928266
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC101928266 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928266 Gene

Genomic Locations for LOC101928266 Gene
chr17:9,171,068-9,179,118
(GRCh38/hg38)
Size:
8,051 bases
Orientation:
Minus strand
chr17:9,074,385-9,082,435
(GRCh37/hg19)

Genomic View for LOC101928266 Gene

Genes around LOC101928266 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928266 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928266 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928266 Gene

Proteins for LOC101928266 Gene

Post-translational modifications for LOC101928266 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928266 Gene

Domains & Families for LOC101928266 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101928266 Gene

Function for LOC101928266 Gene

Phenotypes From GWAS Catalog for LOC101928266 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928266 Gene

Localization for LOC101928266 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928266 Gene

Pathways & Interactions for LOC101928266 Gene

SuperPathways for LOC101928266 Gene

No Data Available

Interacting Proteins for LOC101928266 Gene

Gene Ontology (GO) - Biological Process for LOC101928266 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928266 Gene

Drugs & Compounds for LOC101928266 Gene

No Compound Related Data Available

Transcripts for LOC101928266 Gene

mRNA/cDNA for LOC101928266 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928266 Gene

No ASD Table

Relevant External Links for LOC101928266 Gene

GeneLoc Exon Structure for
LOC101928266

Expression for LOC101928266 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101928266 Gene

genes like me logo Genes that share expression patterns with LOC101928266: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928266 Gene

Orthologs for LOC101928266 Gene

Evolution for LOC101928266 Gene

ENSEMBL:
Gene Tree for LOC101928266 (if available)
TreeFam:
Gene Tree for LOC101928266 (if available)

No data available for Orthologs for LOC101928266 Gene

Paralogs for LOC101928266 Gene

No data available for Paralogs for LOC101928266 Gene

Variants for LOC101928266 Gene

Sequence variations from dbSNP and Humsavar for LOC101928266 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1000290521 -- 9,175,644(+) GGGTC(A/G)CTGGG intron-variant, nc-transcript-variant
rs1000308138 -- 9,176,401(+) TCTGT(A/G)TATAT intron-variant, nc-transcript-variant
rs1000423917 -- 9,176,682(+) TTCCA(A/G)GCAAG intron-variant, nc-transcript-variant
rs1001347741 -- 9,172,596(+) TCAAC(A/G)ACAAG intron-variant
rs1001368399 -- 9,172,798(+) CCTGA(A/G)GTCAG intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101928266 Gene

Variant ID Type Subtype PubMed ID
nsv833355 CNV loss 17160897
nsv7289 OTHER inversion 18451855
nsv574341 CNV gain 21841781

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for LOC101928266 Gene

Disorders for LOC101928266 Gene

Relevant External Links for LOC101928266

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC101928266

No disorders were found for LOC101928266 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101928266 Gene

Publications for LOC101928266 Gene

No publications were found for LOC101928266 Gene.

Products for LOC101928266 Gene

Sources for LOC101928266 Gene

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