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Aliases for LOC101928202 Gene

Subcategory (RNA class) for LOC101928202 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101928202 Gene

  • SLAM Family Member 5 3
  • AL138900.2 5

External Ids for LOC101928202 Gene

Previous GeneCards Identifiers for LOC101928202 Gene

  • GC01U903780

Summaries for LOC101928202 Gene

GeneCards Summary for LOC101928202 Gene

LOC101928202 (SLAM Family Member 5) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101928202 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101928202 Gene

Genomics for LOC101928202 Gene

GeneHancer (GH) Regulatory Elements for LOC101928202 Gene

Promoters and enhancers for LOC101928202 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I157311 Enhancer 0.6 ENCODE 562.2 +0.0 41 0.2 SCRT1 MEIS2 CTCF PKNOX1 ZNF654 NCOA1 REST RAD21 CC2D1A SKIL LOC101928202 LOC105371456
GH01I157312 Enhancer 0.6 ENCODE 550.8 -0.1 -129 0.1 MEIS2 CTCF ZNF654 NCOA1 REST RAD21 CC2D1A SKIL BRD9 ARID2 LOC101928202 PIR34529
GH01I157325 Enhancer 0.9 ENCODE 0.4 -14.0 -14030 0.1 ATF1 PKNOX1 ARNT TCF12 GATA2 ATF7 NCOA1 REST ZNF592 MBD2 LOC101928202 PIR34529
GH01I157279 Enhancer 1 FANTOM5 0.3 +31.7 31730 0.3 HDGF SMAD1 ATF1 FOXA2 ARNT NCOA2 TCF12 ZNF766 GATA2 ATF7 LOC105371456 LOC105371455 LOC101928202
GH01I157366 Enhancer 0.8 ENCODE 0.2 -55.8 -55817 1.6 HDAC1 PKNOX1 ATF1 NFRKB ATF7 ELF1 ZNF592 ZNF148 MEF2D MTA1 PIR34529 LOC101928202
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101928202 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928202 Gene

Genomic Locations for LOC101928202 Gene
chr1:157,284,342-157,311,377
(GRCh38/hg38)
Size:
27,036 bases
Orientation:
Minus strand
chr1:157,257,493-157,257,843
(GRCh37/hg19)

Genomic View for LOC101928202 Gene

Genes around LOC101928202 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928202 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928202 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928202 Gene

Proteins for LOC101928202 Gene

Post-translational modifications for LOC101928202 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928202 Gene

Domains & Families for LOC101928202 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101928202 Gene

Function for LOC101928202 Gene

Phenotypes From GWAS Catalog for LOC101928202 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928202 Gene

Localization for LOC101928202 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928202 Gene

Pathways & Interactions for LOC101928202 Gene

SuperPathways for LOC101928202 Gene

No Data Available

Interacting Proteins for LOC101928202 Gene

Gene Ontology (GO) - Biological Process for LOC101928202 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928202 Gene

Drugs & Compounds for LOC101928202 Gene

No Compound Related Data Available

Transcripts for LOC101928202 Gene

mRNA/cDNA for LOC101928202 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928202 Gene

No ASD Table

Relevant External Links for LOC101928202 Gene

GeneLoc Exon Structure for
LOC101928202

Expression for LOC101928202 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101928202 Gene

genes like me logo Genes that share expression patterns with LOC101928202: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928202 Gene

Orthologs for LOC101928202 Gene

Evolution for LOC101928202 Gene

ENSEMBL:
Gene Tree for LOC101928202 (if available)
TreeFam:
Gene Tree for LOC101928202 (if available)

No data available for Orthologs for LOC101928202 Gene

Paralogs for LOC101928202 Gene

No data available for Paralogs for LOC101928202 Gene

Variants for LOC101928202 Gene

Sequence variations from dbSNP and Humsavar for LOC101928202 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000001158 -- 157,299,714(-) A/G intron_variant
rs1000072 -- 157,285,862(-) G/A non_coding_transcript_variant
rs1000073 -- 157,285,606(-) A/G non_coding_transcript_variant
rs1000231956 -- 157,305,059(-) A/G intron_variant
rs1000236008 -- 157,290,349(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928202 Gene

Disorders for LOC101928202 Gene

No disorders were found for LOC101928202 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928202 Gene

Publications for LOC101928202 Gene

No publications were found for LOC101928202 Gene.

Products for LOC101928202 Gene

Sources for LOC101928202 Gene

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