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Aliases for LOC101928120 Gene

Subcategory (RNA class) for LOC101928120 Gene

antisense

Aliases for LOC101928120 Gene

  • Uncharacterized LOC101928120 3
  • RP11-307C12.12 5

External Ids for LOC101928120 Gene

ORGUL Members for LOC101928120 Gene

Previous GeneCards Identifiers for LOC101928120 Gene

  • GC01U903935

Summaries for LOC101928120 Gene

GeneCards Summary for LOC101928120 Gene

LOC101928120 (Uncharacterized LOC101928120) is a Protein Coding gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101928120 Gene

Genomics for LOC101928120 Gene

Regulatory Elements for LOC101928120 Gene

Enhancers for LOC101928120 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F154324 1.5 FANTOM5 ENCODE 53.8 -634.4 -634445 5.7 HDGF PKNOX1 CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A ZNF2 YY1 ZNF143 CHTOP LOC101928120 INTS3 THBS3 PYGO2 SLC27A3 RUSC1-AS1 DPM3 ENSG00000272654 ENSG00000238279
GH01F155242 1.2 ENCODE 49.5 +282.7 282683 2.9 CREB3L1 YBX1 FEZF1 YY1 ZNF416 ZNF143 ZNF548 ZNF263 SP3 TBX21 KIAA0907 ENSG00000271267 MSTO2P RUSC1-AS1 THBS3 ASH1L PYGO2 LOC101928120 KRTCAP2 GBA
GH01F155123 1.5 FANTOM5 ENCODE 36.4 +166.5 166463 8.7 PKNOX1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 FOS LOC101928120 MSTO2P PYGO2 KIAA0907 ASH1L GBAP1 EFNA1 DPM3 TDRD10 ASH1L-AS1
GH01F155222 1.2 ENCODE 41.5 +264.2 264171 5.9 CREB3L1 ZFP64 DMAP1 YY1 ZNF143 ZNF548 ZNF263 SP3 NFYC TBX21 KIAA0907 ENSG00000271267 MSTO2P THBS3 LOC101928120 PYGO2 GBAP1 ASH1L DPM3 RUSC1-AS1
GH01F154950 1.1 ENCODE 43.3 -6.8 -6832 8.7 PKNOX1 ZFP64 ARID4B SIN3A FOS ZNF263 NFYC REST KAT8 SMARCA4 KIAA0907 ENSG00000271267 MSTO2P THBS3 LOC101928120 PYGO2 RUSC1-AS1 ASH1L-AS1 ASH1L CHRNB2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC101928120 on UCSC Golden Path with GeneCards custom track

Promoters for LOC101928120 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000545464 141 2600 HDGF ARID4B SIN3A ZNF2 YY1 ZNF143 ZNF207 KLF13 PAF1 SP3

Genomic Location for LOC101928120 Gene

Chromosome:
1
Start:
154,961,560 bp from pter
End:
154,962,625 bp from pter
Size:
1,066 bases
Orientation:
Plus strand

Genomic View for LOC101928120 Gene

Genes around LOC101928120 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928120 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928120 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928120 Gene

Proteins for LOC101928120 Gene

Post-translational modifications for LOC101928120 Gene

No Post-translational modifications

Other Protein References for LOC101928120 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC101928120 Gene

Domains & Families for LOC101928120 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101928120 Gene

Function for LOC101928120 Gene

Animal Model Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928120 Gene

Localization for LOC101928120 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC101928120 Gene

Pathways & Interactions for LOC101928120 Gene

SuperPathways for LOC101928120 Gene

No Data Available

Interacting Proteins for LOC101928120 Gene

Gene Ontology (GO) - Biological Process for LOC101928120 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928120 Gene

Transcripts for LOC101928120 Gene

mRNA/cDNA for LOC101928120 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928120 Gene

No ASD Table

Relevant External Links for LOC101928120 Gene

GeneLoc Exon Structure for
LOC101928120

Expression for LOC101928120 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for LOC101928120 Gene

Orthologs for LOC101928120 Gene

Evolution for LOC101928120 Gene

ENSEMBL:
Gene Tree for LOC101928120 (if available)
TreeFam:
Gene Tree for LOC101928120 (if available)

No data available for Orthologs for LOC101928120 Gene

Paralogs for LOC101928120 Gene

No data available for Paralogs for LOC101928120 Gene

Variants for LOC101928120 Gene

Sequence variations from dbSNP and Humsavar for LOC101928120 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1050947 -- 154,963,029(-) ACTCT(A/G)CGCCA downstream-variant-500B, upstream-variant-2KB, utr-variant-3-prime
rs111936177 -- 154,960,264(+) CGTCT(C/G)AAAAA intron-variant, upstream-variant-2KB
rs112662266 -- 154,961,028(+) AGACC(G/T)GGAAG upstream-variant-2KB, splice-acceptor-variant
rs113804194 -- 154,962,789(+) GGAAA(A/G)TAAGT downstream-variant-500B, upstream-variant-2KB, utr-variant-3-prime
rs11585573 -- 154,959,896(+) CAGAG(A/C)TAAAC intron-variant, upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC101928120 Gene

Disorders for LOC101928120 Gene

Relevant External Links for LOC101928120

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC101928120

No disorders were found for LOC101928120 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101928120 Gene

Publications for LOC101928120 Gene

  1. Full-length transcriptome analysis of human retina-derived cell lines ARPE-19 and Y79 using the vector-capping method. (PMID: 21697133) Oshikawa M. … Kato S. (Invest. Ophthalmol. Vis. Sci. 2011) 3 64

Products for LOC101928120 Gene

Sources for LOC101928120 Gene

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