Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC101927902 Gene

Subcategory (RNA class) for LOC101927902 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101927902 Gene

  • Uncharacterized LOC101927902 3
  • AC007384.1 5

External Ids for LOC101927902 Gene

Previous GeneCards Identifiers for LOC101927902 Gene

  • GC07U903616
  • GC07P104582

Summaries for LOC101927902 Gene

GeneCards Summary for LOC101927902 Gene

LOC101927902 (Uncharacterized LOC101927902) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101927902 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101927902 Gene

Genomics for LOC101927902 Gene

Regulatory Elements for LOC101927902 Gene

Enhancers for LOC101927902 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H104940 1.8 FANTOM5 ENCODE dbSUPER 9 +2.7 2714 6 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 YBX1 SLC30A9 ZNF766 ORC5 RINT1 LINC01004 ATXN7L1 KMT2E RNU6-1322P KMT2E-AS1 LOC101927902 SRPK2 GC07P104968
GH07H104976 2 FANTOM5 Ensembl ENCODE dbSUPER 5.9 +41.1 41068 10 HNRNPUL1 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 KMT2E ATXN7L1 EIF4BP6 LINC01004 KMT2E-AS1 SRPK2 LOC101927902 GC07P104969
GH07H104956 1.8 FANTOM5 Ensembl ENCODE dbSUPER 6.4 +16.6 16601 2 HDGF BMI1 ZBTB40 BATF RFX5 ZSCAN5C FOS ATF7 RUNX3 CREM LOC101927902 KMT2E GC07P104968
GH07H104960 1.9 FANTOM5 Ensembl ENCODE dbSUPER 5.6 +21.8 21848 4 PKNOX1 ATF1 FOXA2 ARID4B DMAP1 TCF12 ZNF766 GATA2 FOS RUNX3 LOC101927902 KMT2E SRPK2 GC07P104968
GH07H104921 1.5 Ensembl ENCODE dbSUPER 6.9 -15.8 -15803 6 HDGF PKNOX1 ATF1 ARNT ARID4B SIN3A FEZF1 YY1 ZNF121 GATA2 LOC101927902 LHFPL3-AS2 GC07P104915
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC101927902 on UCSC Golden Path with GeneCards custom track

Promoters for LOC101927902 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000216263 67 401 SP1 POLR2A SMAD5 CHD1 NFYC ZBTB33

Genomic Location for LOC101927902 Gene

Chromosome:
7
Start:
104,940,933 bp from pter
End:
105,002,028 bp from pter
Size:
61,096 bases
Orientation:
Plus strand

Genomic View for LOC101927902 Gene

Genes around LOC101927902 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927902 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927902 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927902 Gene

Proteins for LOC101927902 Gene

Post-translational modifications for LOC101927902 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927902 Gene

Domains & Families for LOC101927902 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101927902 Gene

Function for LOC101927902 Gene

Phenotypes From GWAS Catalog for LOC101927902 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927902 Gene

Localization for LOC101927902 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927902 Gene

Pathways & Interactions for LOC101927902 Gene

SuperPathways for LOC101927902 Gene

No Data Available

Interacting Proteins for LOC101927902 Gene

Gene Ontology (GO) - Biological Process for LOC101927902 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101927902 Gene

Drugs & Compounds for LOC101927902 Gene

No Compound Related Data Available

Transcripts for LOC101927902 Gene

mRNA/cDNA for LOC101927902 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927902 Gene

No ASD Table

Relevant External Links for LOC101927902 Gene

GeneLoc Exon Structure for
LOC101927902

Expression for LOC101927902 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101927902 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101927902 Gene

This gene is overexpressed in Whole Blood (x19.0) and Spleen (x4.8).
genes like me logo Genes that share expression patterns with LOC101927902: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927902 Gene

Orthologs for LOC101927902 Gene

Evolution for LOC101927902 Gene

ENSEMBL:
Gene Tree for LOC101927902 (if available)
TreeFam:
Gene Tree for LOC101927902 (if available)

No data available for Orthologs for LOC101927902 Gene

Paralogs for LOC101927902 Gene

No data available for Paralogs for LOC101927902 Gene

Variants for LOC101927902 Gene

Sequence variations from dbSNP and Humsavar for LOC101927902 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000003054 -- 104,959,560(+) CACGT(A/G)TGTTT intron-variant
rs1000087273 -- 104,954,249(+) ATGGG(G/T)AATAG intron-variant
rs1000097624 -- 104,996,933(+) CGAGC(A/T)ATCTC intron-variant
rs1000102139 -- 105,002,678(+) AAAGA(C/T)AGCAA nc-transcript-variant
rs1000107964 -- 104,968,271(+) CCCCT(C/G)AGCCT intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC101927902 Gene

Disorders for LOC101927902 Gene

Relevant External Links for LOC101927902

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC101927902

No disorders were found for LOC101927902 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101927902 Gene

Publications for LOC101927902 Gene

No publications were found for LOC101927902 Gene.

Products for LOC101927902 Gene

Sources for LOC101927902 Gene

Content
Loading form....