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Aliases for LOC101927863 Gene

Subcategory (RNA class) for LOC101927863 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101927863 Gene

  • Uncharacterized LOC101927863 3
  • AC092123.1 5

External Ids for LOC101927863 Gene

Previous GeneCards Identifiers for LOC101927863 Gene

  • GC16U901502

Summaries for LOC101927863 Gene

GeneCards Summary for LOC101927863 Gene

LOC101927863 (Uncharacterized LOC101927863) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101927863 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101927863 Gene

Genomics for LOC101927863 Gene

Regulatory Elements for LOC101927863 Gene

Enhancers for LOC101927863 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16H089558 1.7 Ensembl ENCODE dbSUPER 35.7 -56.1 -56058 7.9 MLX DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC SSRP1 ZNF610 GLIS1 ANKRD11 AFG3L1P TCF25 ZC3H18 ENSG00000259877 ENSG00000268218 RPL13 LOC101927863 MC1R ACSF3
GH16H089993 1.6 Ensembl ENCODE dbSUPER 34.9 -488.7 -488680 3.5 HDGF PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A ZNF2 ZBTB7B SLC30A9 ENSG00000259877 AFG3L1P ANKRD11 MC1R TCF25 ACSF3 ZNF778 LINC00304 LOC101927863 SNORD68
GH16H089503 1.8 FANTOM5 ENCODE dbSUPER 29.8 -0.4 -416 6.1 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC SSRP1 AFG3L1P MC1R ANKRD11 ZC3H18 ENSG00000268218 SPG7 TCF25 LOC101927863 RPL13 ACSF3
GH16H088502 1.9 FANTOM5 Ensembl ENCODE dbSUPER 28.1 +999.7 999683 9 PKNOX1 FOXA2 MLX ZFP64 ARID4B FEZF1 DMAP1 ZNF2 YY1 SLC30A9 ENSG00000259877 LOC101927863 SPG7 ZC3H18 ANKRD11 ENSG00000268218 ENSG00000260121 ACSF3 ENSG00000260279 GALNS
GH16H088809 1.4 ENCODE dbSUPER 37 +695.3 695291 4.4 HNRNPUL1 HDGF PKNOX1 MLX ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 ENSG00000259877 ANKRD11 ZC3H18 SNORD68 LOC101927863 GALNS ENSG00000268218 RPL13 ENSG00000260121 ACSF3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC101927863 on UCSC Golden Path with GeneCards custom track

Promoters for LOC101927863 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000089734 -1832 2001 FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143

Genomic Locations for LOC101927863 Gene

Genomic Locations for LOC101927863 Gene
chr16:89,491,517-89,506,568
(GRCh38/hg38)
Size:
15,052 bases
Orientation:
Minus strand
chr16:89,558,425-89,570,868
(GRCh37/hg19)

Genomic View for LOC101927863 Gene

Genes around LOC101927863 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927863 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927863 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927863 Gene

Proteins for LOC101927863 Gene

Post-translational modifications for LOC101927863 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927863 Gene

Domains & Families for LOC101927863 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101927863 Gene

Function for LOC101927863 Gene

Phenotypes From GWAS Catalog for LOC101927863 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927863 Gene

Localization for LOC101927863 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927863 Gene

Pathways & Interactions for LOC101927863 Gene

SuperPathways for LOC101927863 Gene

No Data Available

Interacting Proteins for LOC101927863 Gene

Gene Ontology (GO) - Biological Process for LOC101927863 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101927863 Gene

Drugs & Compounds for LOC101927863 Gene

No Compound Related Data Available

Transcripts for LOC101927863 Gene

mRNA/cDNA for LOC101927863 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927863 Gene

No ASD Table

Relevant External Links for LOC101927863 Gene

GeneLoc Exon Structure for
LOC101927863

Expression for LOC101927863 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927863 Gene

Orthologs for LOC101927863 Gene

Evolution for LOC101927863 Gene

ENSEMBL:
Gene Tree for LOC101927863 (if available)
TreeFam:
Gene Tree for LOC101927863 (if available)

No data available for Orthologs for LOC101927863 Gene

Paralogs for LOC101927863 Gene

No data available for Paralogs for LOC101927863 Gene

Variants for LOC101927863 Gene

Sequence variations from dbSNP and Humsavar for LOC101927863 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs1000202669 -- 89,493,974(+) AACAG(A/G)GCAAC intron-variant
rs1000664186 -- 89,496,175(+) GCTCA(A/G)CCTCC intron-variant
rs1000708562 -- 89,501,244(+) AACTC(A/G)CGAGG intron-variant
rs1000806884 -- 89,501,087(+) TGCCA(A/G)GGTGG intron-variant
rs1000959360 -- 89,506,021(+) ATAAA(C/T)GCATA upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC101927863 Gene

Disorders for LOC101927863 Gene

No disorders were found for LOC101927863 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927863 Gene

Publications for LOC101927863 Gene

No publications were found for LOC101927863 Gene.

Products for LOC101927863 Gene

Sources for LOC101927863 Gene

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