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Aliases for LOC101927863 Gene

Subcategory (RNA class) for LOC101927863 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101927863 Gene

  • Uncharacterized LOC101927863 3
  • RP11-104N10.1 5

External Ids for LOC101927863 Gene

Previous GeneCards Identifiers for LOC101927863 Gene

  • GC16U901502

Summaries for LOC101927863 Gene

GeneCards Summary for LOC101927863 Gene

LOC101927863 (Uncharacterized LOC101927863) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101927863 Gene

Genomics for LOC101927863 Gene

Regulatory Elements for LOC101927863 Gene

Enhancers for LOC101927863 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F089401 1.3 FANTOM5 Ensembl ENCODE 32 +98.5 98513 13.1 PKNOX1 ARID4B SIN3A FEZF1 ZNF2 YY1 FOS PAF1 MXD4 ZHX2 AFG3L1P LOC101927863 MC1R SPG7 ENSG00000259877 URAHP ENSG00000268218 SNORD68 RPL13 RNU6-430P
GH16F088809 0.6 ENCODE 27.6 +695.3 695291 4.4 HDGF PKNOX1 ARNT MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SNORD68 GALNS LOC101927863 RPL13 ENSG00000260121 ENSG00000259877 ZNF778 CTU2 APRT SPG7
GH16F090032 0.6 ENCODE 19.7 -525.6 -525600 0.2 HDGF ZNF133 INSM2 ZNF76 ZEB1 ZNF23 KLF7 ZNF548 ZNF391 SMARCA5 SNORD68 RPL13 LOC101927863 GAS8 ENSG00000259877 GAS8-AS1 GC16P090043
GH16F089378 1.3 FANTOM5 Ensembl ENCODE 19.2 +124.7 124693 6.6 HDGF ARID4B SIN3A ZNF48 ZNF121 GATA2 ZNF207 ZNF263 SP5 MXD4 LOC101927863 AFG3L1P SPG7 MC1R ENSG00000259877 URAHP LOC100128882 RNU6-430P CTU2 FAM157C
GH16F089439 1.2 FANTOM5 Ensembl ENCODE 14.9 +58.4 58368 17.2 PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF207 SPG7 AFG3L1P RPL13 MC1R LOC101927863 DBNDD1 ENSG00000259877 URAHP ENSG00000268218 ENSG00000260279
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around LOC101927863 on UCSC Golden Path with GeneCards custom track

Promoters for LOC101927863 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000054133 -1832 2401 PKNOX1 MLX CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9

Genomic Location for LOC101927863 Gene

Chromosome:
16
Start:
89,491,517 bp from pter
End:
89,506,568 bp from pter
Size:
15,052 bases
Orientation:
Minus strand

Genomic View for LOC101927863 Gene

Genes around LOC101927863 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927863 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927863 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927863 Gene

Proteins for LOC101927863 Gene

Post-translational modifications for LOC101927863 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927863 Gene

Domains & Families for LOC101927863 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101927863 Gene

Function for LOC101927863 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927863 Gene

Localization for LOC101927863 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC101927863 Gene

Pathways & Interactions for LOC101927863 Gene

SuperPathways for LOC101927863 Gene

No Data Available

Interacting Proteins for LOC101927863 Gene

Gene Ontology (GO) - Biological Process for LOC101927863 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101927863 Gene

Transcripts for LOC101927863 Gene

mRNA/cDNA for LOC101927863 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927863 Gene

No ASD Table

Relevant External Links for LOC101927863 Gene

GeneLoc Exon Structure for
LOC101927863

Expression for LOC101927863 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for LOC101927863 Gene

Orthologs for LOC101927863 Gene

Evolution for LOC101927863 Gene

ENSEMBL:
Gene Tree for LOC101927863 (if available)
TreeFam:
Gene Tree for LOC101927863 (if available)

No data available for Orthologs for LOC101927863 Gene

Paralogs for LOC101927863 Gene

No data available for Paralogs for LOC101927863 Gene

Variants for LOC101927863 Gene

Sequence variations from dbSNP and Humsavar for LOC101927863 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs10622836 -- 89,499,346(+) TATTT(-/TTTT)ATTTT intron-variant
rs111468922 -- 89,503,871(+) ATTTT(C/T)GTATT intron-variant
rs111620372 -- 89,495,019(+) CCCAG(C/T)GCCAG intron-variant
rs111837616 -- 89,502,947(+) CCGGG(C/T)GTGGT intron-variant
rs111874137 -- 89,492,505(+) TGTTT(A/C)CCCTA intron-variant, nc-transcript-variant, upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC101927863 Gene

Disorders for LOC101927863 Gene

No disorders were found for LOC101927863 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927863 Gene

Publications for LOC101927863 Gene

No publications were found for LOC101927863 Gene.

Products for LOC101927863 Gene

Sources for LOC101927863 Gene

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