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Aliases for LOC101927237 Gene

Subcategory (RNA class) for LOC101927237 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101927237 Gene

  • Uncharacterized LOC101927237 3
  • RP11-584P21.2 5

External Ids for LOC101927237 Gene

Previous GeneCards Identifiers for LOC101927237 Gene

  • GC04U901679

Summaries for LOC101927237 Gene

GeneCards Summary for LOC101927237 Gene

LOC101927237 (Uncharacterized LOC101927237) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101927237 Gene

Genomics for LOC101927237 Gene

Regulatory Elements for LOC101927237 Gene

Enhancers for LOC101927237 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F067522 0.9 ENCODE 21.2 -54.9 -54870 1.8 HDAC1 PKNOX1 ATF1 ARNT TBL1XR1 NFRKB CHAMP1 GATA2 CREM SMARCA5 LOC101927237 CENPC STAP1 GC04M067379
GH04F067543 1.1 ENCODE 11.5 -76.9 -76882 2.8 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 CENPC UBA6 LOC101927237 STAP1 GCOM2 GC04M067379
GH04F067558 0.8 ENCODE 11.6 -90.4 -90416 1.2 CTCF TBL1XR1 BMI1 POLR2A EED ETV6 CREM MTA2 CBFB ZBED1 LOC101927237 STAP1 CENPC
GH04F067574 1.2 Ensembl ENCODE 6.9 -107.9 -107861 2.8 TBP NFRKB ZNF366 CBX5 ETV6 CREM BCLAF1 SMAD5 GTF2B ZEB2 CENPC UBA6 STAP1 LOC101927237 GC04P067584
GH04F067437 0.8 Ensembl ENCODE 10 +30.0 29999 1.4 ATF3 CEBPA CEBPB ZNF384 CENPC LOC101927237 ENSG00000274759 RNU1-63P GC04M067430
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC101927237 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC101927237 Gene

Chromosome:
4
Start:
67,417,305 bp from pter
End:
67,468,251 bp from pter
Size:
50,947 bases
Orientation:
Minus strand

Genomic View for LOC101927237 Gene

Genes around LOC101927237 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927237 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927237 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927237 Gene

Proteins for LOC101927237 Gene

Post-translational modifications for LOC101927237 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927237 Gene

Domains & Families for LOC101927237 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101927237 Gene

Function for LOC101927237 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927237 Gene

Localization for LOC101927237 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC101927237 Gene

Pathways & Interactions for LOC101927237 Gene

SuperPathways for LOC101927237 Gene

No Data Available

Interacting Proteins for LOC101927237 Gene

Gene Ontology (GO) - Biological Process for LOC101927237 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101927237 Gene

Transcripts for LOC101927237 Gene

mRNA/cDNA for LOC101927237 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927237 Gene

No ASD Table

Relevant External Links for LOC101927237 Gene

GeneLoc Exon Structure for
LOC101927237

Expression for LOC101927237 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101927237 Gene

genes like me logo Genes that share expression patterns with LOC101927237: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for LOC101927237 Gene

Orthologs for LOC101927237 Gene

Evolution for LOC101927237 Gene

ENSEMBL:
Gene Tree for LOC101927237 (if available)
TreeFam:
Gene Tree for LOC101927237 (if available)

No data available for Orthologs for LOC101927237 Gene

Paralogs for LOC101927237 Gene

No data available for Paralogs for LOC101927237 Gene

Variants for LOC101927237 Gene

Sequence variations from dbSNP and Humsavar for LOC101927237 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs10009461 -- 67,418,454(+) CTAGA(A/C)ATTTT nc-transcript-variant
rs10016193 -- 67,417,163(+) tatct(A/G)tctgt downstream-variant-500B
rs10016194 -- 67,417,167(+) tgtct(A/G)tctat downstream-variant-500B
rs10019750 -- 67,418,561(+) ACCAC(A/G)CAGAA nc-transcript-variant
rs11131705 -- 67,423,405(+) GGTAT(A/G)TTCTA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for LOC101927237 Gene

Variant ID Type Subtype PubMed ID
esv3600848 CNV gain 21293372
dgv5241n100 CNV gain 25217958

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for LOC101927237 Gene

Disorders for LOC101927237 Gene

Relevant External Links for LOC101927237

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC101927237

No disorders were found for LOC101927237 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101927237 Gene

Publications for LOC101927237 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for LOC101927237 Gene

Sources for LOC101927237 Gene

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