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Aliases for LOC101409256 Gene

Subcategory (RNA class) for LOC101409256 Gene

lncRNA

Aliases for LOC101409256 Gene

  • Cell Division Cycle 42 Pseudogene 3

External Ids for LOC101409256 Gene

ORGUL Members for LOC101409256 Gene

Previous GeneCards Identifiers for LOC101409256 Gene

  • GC07U903650

Summaries for LOC101409256 Gene

GeneCards Summary for LOC101409256 Gene

LOC101409256 (Cell Division Cycle 42 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101409256 Gene

Genomics for LOC101409256 Gene

Regulatory Elements for LOC101409256 Gene

Enhancers for LOC101409256 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G090401 0.7 ENCODE 0.4 +5.8 5776 0.3 HDAC1 TAL1 REST RAD21 TCF12 ARID1B NFIC HDAC2 KLF16 IKZF1 GTPBP10 ENSG00000273299 LOC101409256
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC101409256 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC101409256 Gene

Chromosome:
7
Start:
90,396,292 bp from pter
End:
90,398,236 bp from pter
Size:
1,945 bases
Orientation:
Plus strand

Genomic View for LOC101409256 Gene

Genes around LOC101409256 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101409256 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101409256 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101409256 Gene

Proteins for LOC101409256 Gene

Post-translational modifications for LOC101409256 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101409256 Gene

Domains & Families for LOC101409256 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101409256 Gene

Function for LOC101409256 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101409256 Gene

Localization for LOC101409256 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC101409256 Gene

Pathways & Interactions for LOC101409256 Gene

SuperPathways for LOC101409256 Gene

No Data Available

Interacting Proteins for LOC101409256 Gene

Gene Ontology (GO) - Biological Process for LOC101409256 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101409256 Gene

Drugs & Compounds for LOC101409256 Gene

No Compound Related Data Available

Transcripts for LOC101409256 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101409256 Gene

No ASD Table

Relevant External Links for LOC101409256 Gene

GeneLoc Exon Structure for
LOC101409256

No data available for mRNA/cDNA for LOC101409256 Gene

Expression for LOC101409256 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101409256 Gene

Orthologs for LOC101409256 Gene

No data available for Orthologs and Evolution for LOC101409256 Gene

Paralogs for LOC101409256 Gene

No data available for Paralogs for LOC101409256 Gene

Variants for LOC101409256 Gene

Sequence variations from dbSNP and Humsavar for LOC101409256 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000061907 -- 90,397,336(+) TTGCC(A/G)TTTCC nc-transcript-variant
rs1001977282 -- 90,397,962(+) CCTTA(G/T)TTCTG nc-transcript-variant
rs1002252835 -- 90,398,709(+) AAGAC(A/T)AGCCT downstream-variant-500B
rs1003339903 -- 90,395,899(+) AATCT(A/G)TGATA upstream-variant-2KB
rs1004128553 -- 90,396,318(+) AAGAG(A/G)ATATA nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101409256 Gene

Variant ID Type Subtype PubMed ID
esv24241 CNV loss 19812545
esv3891163 CNV loss 25118596
nsv607785 CNV loss 21841781

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for LOC101409256 Gene

Disorders for LOC101409256 Gene

Relevant External Links for LOC101409256

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC101409256

No disorders were found for LOC101409256 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101409256 Gene

Publications for LOC101409256 Gene

No publications were found for LOC101409256 Gene.

Products for LOC101409256 Gene

Sources for LOC101409256 Gene

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