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Aliases for LOC100506682 Gene

Subcategory (RNA class) for LOC100506682 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC100506682 Gene

  • Uncharacterized LOC100506682 3
  • AC000124.1 5

External Ids for LOC100506682 Gene

Previous GeneCards Identifiers for LOC100506682 Gene

  • GC07P127117

Summaries for LOC100506682 Gene

GeneCards Summary for LOC100506682 Gene

LOC100506682 (Uncharacterized LOC100506682) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100506682 Gene

Genomics for LOC100506682 Gene

Genomic Location for LOC100506682 Gene

Chromosome:
7
Start:
127,476,883 bp from pter
End:
127,485,804 bp from pter
Size:
8,922 bases
Orientation:
Plus strand

Genomic View for LOC100506682 Gene

Genes around LOC100506682 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100506682 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100506682 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100506682 Gene

No data available for Regulatory Elements for LOC100506682 Gene

Proteins for LOC100506682 Gene

Post-translational modifications for LOC100506682 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100506682 Gene

Domains & Families for LOC100506682 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100506682 Gene

Function for LOC100506682 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100506682 Gene

Localization for LOC100506682 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC100506682 Gene

Pathways & Interactions for LOC100506682 Gene

SuperPathways for LOC100506682 Gene

No Data Available

Interacting Proteins for LOC100506682 Gene

Gene Ontology (GO) - Biological Process for LOC100506682 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100506682 Gene

Transcripts for LOC100506682 Gene

mRNA/cDNA for LOC100506682 Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LOC100506682 Gene

Uncharacterized LOC100506682:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100506682 Gene

No ASD Table

Relevant External Links for LOC100506682 Gene

GeneLoc Exon Structure for
LOC100506682

Expression for LOC100506682 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100506682 Gene

SOURCE GeneReport for Unigene cluster for LOC100506682 Gene:

Hs.148450
genes like me logo Genes that share expression patterns with LOC100506682: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100506682 Gene

Orthologs for LOC100506682 Gene

Evolution for LOC100506682 Gene

ENSEMBL:
Gene Tree for LOC100506682 (if available)
TreeFam:
Gene Tree for LOC100506682 (if available)

No data available for Orthologs for LOC100506682 Gene

Paralogs for LOC100506682 Gene

No data available for Paralogs for LOC100506682 Gene

Variants for LOC100506682 Gene

Sequence variations from dbSNP and Humsavar for LOC100506682 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000082558 -- 127,477,954(+) GCCTT(C/T)AACCC intron-variant
rs1000146998 -- 127,476,423(+) CTGTG(A/T)CTATA upstream-variant-2KB
rs1000927639 -- 127,484,319(+) CACCA(C/T)GTAAG intron-variant
rs1001279463 -- 127,485,936(+) AGACT(A/G)TATCA intron-variant
rs1001629635 -- 127,481,431(+) CCGAC(C/T)CCCAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for LOC100506682 Gene

Variant ID Type Subtype PubMed ID
esv33524 CNV loss 17666407

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for LOC100506682 Gene

Disorders for LOC100506682 Gene

Relevant External Links for LOC100506682

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC100506682

No disorders were found for LOC100506682 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC100506682 Gene

Publications for LOC100506682 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3 64

Products for LOC100506682 Gene

Sources for LOC100506682 Gene

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