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Aliases for LOC100421637 Gene

Aliases for LOC100421637 Gene

  • Acyl-CoA Synthetase Long Chain Family Member 3 Pseudogene 3
  • AC080128.1 5

External Ids for LOC100421637 Gene

Previous GeneCards Identifiers for LOC100421637 Gene

  • GC03U901532
  • GC03P133480

Summaries for LOC100421637 Gene

GeneCards Summary for LOC100421637 Gene

LOC100421637 (Acyl-CoA Synthetase Long Chain Family Member 3 Pseudogene) is a Pseudogene.

Additional gene information for LOC100421637 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100421637 Gene

Genomics for LOC100421637 Gene

Regulatory Elements for LOC100421637 Gene

Enhancers for LOC100421637 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H133742 1.5 Ensembl ENCODE dbSUPER 0.4 -17.4 -17436 0.8 FOXA2 ATF1 MLX ARNT ARID4B DMAP1 YY1 SP5 MXD4 NFYC RNU6-678P TOPBP1 TF PIR42738 LOC100421637
GH03H133763 0.8 ENCODE dbSUPER 0.7 +4.3 4342 1.3 PAF1 NFIA POLR2A ZBTB33 SRPRB TF C3orf36 LOC100421637
GH03H133747 1.1 ENCODE dbSUPER 0.4 -11.9 -11933 1 HDAC1 HDGF ATF1 TBL1XR1 RAD21 TCF12 GATA2 EGR1 ATF7 CREM TF LOC100421637 PIR42738
GH03H133752 0.9 dbSUPER 0.4 -6.6 -6642 2.3 HDAC1 PKNOX1 TBL1XR1 ARNT CHAMP1 TCF12 ZNF766 GATA2 ATF7 NCOA1 TF SRPRB LOC100421637 PIR42738
GH03H133754 0.4 dbSUPER 0.7 -4.8 -4780 1.2 POLR2A SRPRB TF LOC100421637 PIR42738
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC100421637 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100421637 Gene

Genomic Locations for LOC100421637 Gene
chr3:133,760,300-133,762,363
(GRCh38/hg38)
Size:
2,064 bases
Orientation:
Plus strand
chr3:133,479,144-133,481,207
(GRCh37/hg19)

Genomic View for LOC100421637 Gene

Genes around LOC100421637 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100421637 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100421637 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100421637 Gene

Proteins for LOC100421637 Gene

Post-translational modifications for LOC100421637 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100421637 Gene

Domains & Families for LOC100421637 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100421637 Gene

Function for LOC100421637 Gene

Phenotypes From GWAS Catalog for LOC100421637 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100421637 Gene

Localization for LOC100421637 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100421637 Gene

Pathways & Interactions for LOC100421637 Gene

SuperPathways for LOC100421637 Gene

No Data Available

Interacting Proteins for LOC100421637 Gene

Gene Ontology (GO) - Biological Process for LOC100421637 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100421637 Gene

Drugs & Compounds for LOC100421637 Gene

No Compound Related Data Available

Transcripts for LOC100421637 Gene

mRNA/cDNA for LOC100421637 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100421637 Gene

No ASD Table

Relevant External Links for LOC100421637 Gene

GeneLoc Exon Structure for
LOC100421637

Expression for LOC100421637 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100421637 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100421637 Gene

This gene is overexpressed in Liver (x27.7) and Brain - Spinal cord (cervical c-1) (x11.0).
genes like me logo Genes that share expression patterns with LOC100421637: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100421637 Gene

Orthologs for LOC100421637 Gene

Evolution for LOC100421637 Gene

ENSEMBL:
Gene Tree for LOC100421637 (if available)
TreeFam:
Gene Tree for LOC100421637 (if available)

No data available for Orthologs for LOC100421637 Gene

Paralogs for LOC100421637 Gene

No data available for Paralogs for LOC100421637 Gene

Variants for LOC100421637 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC100421637 Gene

Disorders for LOC100421637 Gene

No disorders were found for LOC100421637 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100421637 Gene

Publications for LOC100421637 Gene

No publications were found for LOC100421637 Gene.

Products for LOC100421637 Gene

Sources for LOC100421637 Gene

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