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Aliases for LOC100420667 Gene

Aliases for LOC100420667 Gene

  • Solute Carrier Family 19 Member 3 Pseudogene 3

External Ids for LOC100420667 Gene

Previous GeneCards Identifiers for LOC100420667 Gene

  • GC02U902242
  • GC02M228498

Summaries for LOC100420667 Gene

GeneCards Summary for LOC100420667 Gene

LOC100420667 (Solute Carrier Family 19 Member 3 Pseudogene) is a Pseudogene.

Additional gene information for LOC100420667 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100420667 Gene

Genomics for LOC100420667 Gene

Regulatory Elements for LOC100420667 Gene

Enhancers for LOC100420667 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H227649 0.5 ENCODE 0.7 -0.5 -548 0 ZNF217 SMARCE1 CTBP1 GATA3 TCF7L2 LOC100420667 GC02P227657
GH02H227657 0.7 FANTOM5 dbSUPER 0.4 -8.9 -8890 0 NR3C1 CCL20 AGFG1 GC02P227657 LOC100420667
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC100420667 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC100420667 Gene

Chromosome:
2
Start:
227,642,074 bp from pter
End:
227,648,612 bp from pter
Size:
6,539 bases
Orientation:
Minus strand

Genomic View for LOC100420667 Gene

Genes around LOC100420667 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100420667 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100420667 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100420667 Gene

Proteins for LOC100420667 Gene

Post-translational modifications for LOC100420667 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100420667 Gene

Domains & Families for LOC100420667 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100420667 Gene

Function for LOC100420667 Gene

Phenotypes From GWAS Catalog for LOC100420667 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100420667 Gene

Localization for LOC100420667 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100420667 Gene

Pathways & Interactions for LOC100420667 Gene

SuperPathways for LOC100420667 Gene

No Data Available

Interacting Proteins for LOC100420667 Gene

Gene Ontology (GO) - Biological Process for LOC100420667 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100420667 Gene

Drugs & Compounds for LOC100420667 Gene

No Compound Related Data Available

Transcripts for LOC100420667 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100420667 Gene

No ASD Table

Relevant External Links for LOC100420667 Gene

GeneLoc Exon Structure for
LOC100420667

No data available for mRNA/cDNA for LOC100420667 Gene

Expression for LOC100420667 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100420667 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100420667 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x6.9), Brain - Substantia nigra (x6.1), Brain - Hippocampus (x5.7), and Brain - Caudate (basal ganglia) (x4.1).
genes like me logo Genes that share expression patterns with LOC100420667: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100420667 Gene

Orthologs for LOC100420667 Gene

No data available for Orthologs and Evolution for LOC100420667 Gene

Paralogs for LOC100420667 Gene

No data available for Paralogs for LOC100420667 Gene

Variants for LOC100420667 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC100420667 Gene

Disorders for LOC100420667 Gene

No disorders were found for LOC100420667 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100420667 Gene

Publications for LOC100420667 Gene

No publications were found for LOC100420667 Gene.

Products for LOC100420667 Gene

Sources for LOC100420667 Gene

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