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Aliases for LOC100420435 Gene

Aliases for LOC100420435 Gene

  • Ubiquitin Specific Peptidase 21 Pseudogene 3
  • AC019109.1 5

External Ids for LOC100420435 Gene

Previous GeneCards Identifiers for LOC100420435 Gene

  • GC02U902111
  • GC02P225035

Summaries for LOC100420435 Gene

GeneCards Summary for LOC100420435 Gene

LOC100420435 (Ubiquitin Specific Peptidase 21 Pseudogene) is a Pseudogene.

Additional gene information for LOC100420435 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100420435 Gene

Genomics for LOC100420435 Gene

Regulatory Elements for LOC100420435 Gene

Enhancers for LOC100420435 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H224150 0.9 ENCODE 6.3 -18.2 -18247 1 FOXA2 RAD21 RARA FOS CREM HMG20B USF2 CEBPB NFYC KAT8 LOC100420435 PIR36342 GC02M224071
GH02H224145 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -22.9 -22910 2 FOXA2 ATF1 MLX ARID4B SLC30A9 FOS SP5 MIER2 PPARG KAT8 LOC100420435 GC02M224071 PIR36342
GH02H224141 0.8 Ensembl ENCODE 0.3 -27.0 -26989 1 JUND JUN CEBPB FOS EP300 TCF7L2 LOC100420435 GC02M224071 PIR36342
GH02H224101 1.2 Ensembl ENCODE 0.2 -66.2 -66156 4 ELF3 FOXA2 MLX ARID4B RAD21 THRB RARA FOS ATF7 CREM GC02M224071 PIR36342 LOC100420435
GH02H224195 0.7 ENCODE 0.3 +26.4 26412 1 FOXA2 JUN CEBPB EP300 ZNF623 NR2F2 JUND NR2C1 NR2F6 FOS GC02M224189 LOC100420435
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC100420435 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC100420435 Gene

Chromosome:
2
Start:
224,169,664 bp from pter
End:
224,171,538 bp from pter
Size:
1,875 bases
Orientation:
Plus strand

Genomic View for LOC100420435 Gene

Genes around LOC100420435 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100420435 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100420435 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100420435 Gene

Proteins for LOC100420435 Gene

Post-translational modifications for LOC100420435 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100420435 Gene

Domains & Families for LOC100420435 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100420435 Gene

Function for LOC100420435 Gene

Phenotypes From GWAS Catalog for LOC100420435 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100420435 Gene

Localization for LOC100420435 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100420435 Gene

Pathways & Interactions for LOC100420435 Gene

SuperPathways for LOC100420435 Gene

No Data Available

Interacting Proteins for LOC100420435 Gene

Gene Ontology (GO) - Biological Process for LOC100420435 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100420435 Gene

Drugs & Compounds for LOC100420435 Gene

No Compound Related Data Available

Transcripts for LOC100420435 Gene

mRNA/cDNA for LOC100420435 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100420435 Gene

No ASD Table

Relevant External Links for LOC100420435 Gene

GeneLoc Exon Structure for
LOC100420435

Expression for LOC100420435 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100420435 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100420435 Gene

This gene is overexpressed in Testis (x37.7) and Small Intestine - Terminal Ileum (x7.5).
genes like me logo Genes that share expression patterns with LOC100420435: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100420435 Gene

Orthologs for LOC100420435 Gene

Evolution for LOC100420435 Gene

ENSEMBL:
Gene Tree for LOC100420435 (if available)
TreeFam:
Gene Tree for LOC100420435 (if available)

No data available for Orthologs for LOC100420435 Gene

Paralogs for LOC100420435 Gene

No data available for Paralogs for LOC100420435 Gene

Variants for LOC100420435 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC100420435 Gene

Disorders for LOC100420435 Gene

No disorders were found for LOC100420435 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100420435 Gene

Publications for LOC100420435 Gene

No publications were found for LOC100420435 Gene.

Products for LOC100420435 Gene

Sources for LOC100420435 Gene

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