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Aliases for LOC100420121 Gene

Subcategory (RNA class) for LOC100420121 Gene

lncRNA

Aliases for LOC100420121 Gene

  • MAS Related GPR Family Member X3 Pseudogene 3
  • AC027026.1 5

External Ids for LOC100420121 Gene

ORGUL Members for LOC100420121 Gene

Previous GeneCards Identifiers for LOC100420121 Gene

  • GC11U901708

Summaries for LOC100420121 Gene

GeneCards Summary for LOC100420121 Gene

LOC100420121 (MAS Related GPR Family Member X3 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for LOC100420121 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100420121 Gene

Genomics for LOC100420121 Gene

Regulatory Elements for LOC100420121 Gene

Enhancers for LOC100420121 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11H019951 1.5 Ensembl ENCODE dbSUPER 14.6 -922.7 -922662 3 PKNOX1 FOXA2 ARID4B FEZF1 YBX1 ZNF143 FOS ATF7 MXD4 TSHZ1 LOC390101 LOC100420121 NAV2-AS3 GC11P019860
GH11H019344 1.1 Ensembl ENCODE 14.6 -315.4 -315391 1 PKNOX1 NFIB ZNF2 RAD21 ZEB1 GLIS2 EGR1 FOS RUNX3 EGR2 LOC100420121 LOC390101 LOC645397 ENSG00000256734 LDHAL6A LDHC GC11P019350 NAV2 GC11P019352
GH11H019027 0.6 ENCODE 0.7 +2.0 2041 1 ZNF362 JUND FOXA2 JUN ZNF629 FOS RARA MRGPRX2 LOC100420121 GC11M019000
GH11H019071 1.2 Ensembl ENCODE 0.3 -41.0 -40956 0 HDGF PKNOX1 ATF1 ARNT BRCA1 ZNF2 YY1 ZNF143 ATF7 RUNX3 ZDHHC13 MRGPRX2 LOC100420121
GH11H019025 0.3 FANTOM5 0.7 +4.5 4467 0 MRGPRX2 LOC100420121 GC11M019000
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC100420121 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC100420121 Gene

Chromosome:
11
Start:
19,029,691 bp from pter
End:
19,030,438 bp from pter
Size:
748 bases
Orientation:
Minus strand

Genomic View for LOC100420121 Gene

Genes around LOC100420121 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100420121 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100420121 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100420121 Gene

Proteins for LOC100420121 Gene

Post-translational modifications for LOC100420121 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100420121 Gene

Domains & Families for LOC100420121 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100420121 Gene

Function for LOC100420121 Gene

Phenotypes From GWAS Catalog for LOC100420121 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100420121 Gene

Localization for LOC100420121 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100420121 Gene

Pathways & Interactions for LOC100420121 Gene

SuperPathways for LOC100420121 Gene

No Data Available

Interacting Proteins for LOC100420121 Gene

Gene Ontology (GO) - Biological Process for LOC100420121 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100420121 Gene

Drugs & Compounds for LOC100420121 Gene

No Compound Related Data Available

Transcripts for LOC100420121 Gene

mRNA/cDNA for LOC100420121 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100420121 Gene

No ASD Table

Relevant External Links for LOC100420121 Gene

GeneLoc Exon Structure for
LOC100420121

Expression for LOC100420121 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100420121 Gene

genes like me logo Genes that share expression patterns with LOC100420121: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100420121 Gene

Orthologs for LOC100420121 Gene

Evolution for LOC100420121 Gene

ENSEMBL:
Gene Tree for LOC100420121 (if available)
TreeFam:
Gene Tree for LOC100420121 (if available)

No data available for Orthologs for LOC100420121 Gene

Paralogs for LOC100420121 Gene

No data available for Paralogs for LOC100420121 Gene

Variants for LOC100420121 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC100420121 Gene

Disorders for LOC100420121 Gene

No disorders were found for LOC100420121 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100420121 Gene

Publications for LOC100420121 Gene

No publications were found for LOC100420121 Gene.

Products for LOC100420121 Gene

Sources for LOC100420121 Gene

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