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Aliases for LOC100419928 Gene

Aliases for LOC100419928 Gene

  • M-Phase Phosphoprotein 8 Pseudogene 3
  • RP11-157G21.2 5

External Ids for LOC100419928 Gene

Previous GeneCards Identifiers for LOC100419928 Gene

  • GC12U901494
  • GC12M007591

Summaries for LOC100419928 Gene

GeneCards Summary for LOC100419928 Gene

LOC100419928 (M-Phase Phosphoprotein 8 Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100419928 Gene

Genomics for LOC100419928 Gene

Regulatory Elements for LOC100419928 Gene

Enhancers for LOC100419928 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G006610 2 FANTOM5 Ensembl ENCODE dbSUPER 12.7 +826.5 826493 5.4 CREB3L1 MLX DMAP1 FEZF1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC ENSG00000219410 ENSG00000247853 NCAPD2 CDCA3 SPSB2 LOC100419928 TNFRSF1A C1RL-AS1 ENSG00000256967 NOP2
GH12G006643 1.6 Ensembl ENCODE dbSUPER 12.7 +795.6 795607 2.0 HDGF FOXA2 PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 LOC100419928 PIANP ACRBP LPAR5
GH12G006530 1.4 ENCODE dbSUPER 12.7 +902.9 902895 12.8 MLX CREB3L1 AGO1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 NCAPD2 ENSG00000219410 MRPL51 ENSG00000247853 SPSB2 TAPBPL VAMP1 NOP2 ENSG00000256967 ZNF384
GH12G006866 1.4 ENCODE dbSUPER 12.7 +569.7 569747 8.5 MLX AGO1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC SSRP1 ZNF610 SPSB2 ENSG00000219410 ENSG00000247853 LOC100419928 NCAPD2 ENSG00000256967 LRRC23 CDCA3 TPI1 EMG1
GH12G007439 1.4 FANTOM5 ENCODE 6.8 +0.1 77 1.1 PKNOX1 ATF1 CREB3L1 ARNT SIN3A ELK1 ZNF263 SP3 YY2 ZNF518A CD163L1 LOC100419928 PEX5 NANOG PIR47476
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC100419928 on UCSC Golden Path with GeneCards custom track

Promoters for LOC100419928 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000048412 -111 1000 PKNOX1 ATF1 CREB3L1 ARNT SIN3A ELK1 ZNF263 SP3 YY2 NCOA1

Genomic Location for LOC100419928 Gene

Chromosome:
12
Start:
7,438,761 bp from pter
End:
7,439,990 bp from pter
Size:
1,230 bases
Orientation:
Minus strand

Genomic View for LOC100419928 Gene

Genes around LOC100419928 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100419928 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100419928 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100419928 Gene

Proteins for LOC100419928 Gene

Post-translational modifications for LOC100419928 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100419928 Gene

Domains & Families for LOC100419928 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100419928 Gene

Function for LOC100419928 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100419928 Gene

Localization for LOC100419928 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC100419928 Gene

Pathways & Interactions for LOC100419928 Gene

SuperPathways for LOC100419928 Gene

No Data Available

Interacting Proteins for LOC100419928 Gene

Gene Ontology (GO) - Biological Process for LOC100419928 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100419928 Gene

Drugs & Compounds for LOC100419928 Gene

No Compound Related Data Available

Transcripts for LOC100419928 Gene

mRNA/cDNA for LOC100419928 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100419928 Gene

No ASD Table

Relevant External Links for LOC100419928 Gene

GeneLoc Exon Structure for
LOC100419928

Expression for LOC100419928 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100419928 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100419928 Gene

This gene is overexpressed in Testis (x7.0).
genes like me logo Genes that share expression patterns with LOC100419928: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100419928 Gene

Orthologs for LOC100419928 Gene

Evolution for LOC100419928 Gene

ENSEMBL:
Gene Tree for LOC100419928 (if available)
TreeFam:
Gene Tree for LOC100419928 (if available)

No data available for Orthologs for LOC100419928 Gene

Paralogs for LOC100419928 Gene

No data available for Paralogs for LOC100419928 Gene

Variants for LOC100419928 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC100419928 Gene

Disorders for LOC100419928 Gene

No disorders were found for LOC100419928 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100419928 Gene

Publications for LOC100419928 Gene

No publications were found for LOC100419928 Gene.

Products for LOC100419928 Gene

Sources for LOC100419928 Gene

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