Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC100419814 Gene

Subcategory (RNA class) for LOC100419814 Gene

lncRNA

Aliases for LOC100419814 Gene

  • Ankyrin Repeat Domain 49 Pseudogene 3
  • AC073052.1 5

External Ids for LOC100419814 Gene

ORGUL Members for LOC100419814 Gene

Previous GeneCards Identifiers for LOC100419814 Gene

  • GC02U902081
  • GC02M225365

Summaries for LOC100419814 Gene

GeneCards Summary for LOC100419814 Gene

LOC100419814 (Ankyrin Repeat Domain 49 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for LOC100419814 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100419814 Gene

Genomics for LOC100419814 Gene

Regulatory Elements for LOC100419814 Gene

Enhancers for LOC100419814 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H224517 1.4 Ensembl ENCODE dbSUPER 14.8 -21.6 -21572 8 HDGF PKNOX1 TBL1XR1 RB1 SIN3A BMI1 BATF FOS ATF7 ETV6 CUL3 LOC100419814
GH02H224582 1.3 ENCODE dbSUPER 14 -84.8 -84762 4 HDGF ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZBTB7B YY1 SLC30A9 LOC100419814 CUL3
GH02H224575 1.2 Ensembl ENCODE dbSUPER 14.4 -76.3 -76333 0 PKNOX1 MAFG DPF2 ZNF316 IKZF1 HMBOX1 RUNX3 MAFK IKZF2 EMSY LOC100419814 CUL3
GH02H224483 1.2 Ensembl ENCODE 14.3 +14.9 14936 2 FOXA2 MLX ARID4B SIN3A DMAP1 GLIS2 FOS SP5 ZNF592 KAT8 LOC100419814 CUL3 ENSG00000274629
GH02H224560 0.8 dbSUPER 14.4 -61.9 -61879 3 PKNOX1 FEZF1 BATF CTBP1 GATA3 IKZF2 TCF7L2 ZNF680 JUNB OVOL3 CUL3 LOC100419814
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC100419814 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC100419814 Gene

Chromosome:
2
Start:
224,499,380 bp from pter
End:
224,500,100 bp from pter
Size:
721 bases
Orientation:
Minus strand

Genomic View for LOC100419814 Gene

Genes around LOC100419814 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100419814 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100419814 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100419814 Gene

Proteins for LOC100419814 Gene

Post-translational modifications for LOC100419814 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100419814 Gene

Domains & Families for LOC100419814 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100419814 Gene

Function for LOC100419814 Gene

Phenotypes From GWAS Catalog for LOC100419814 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100419814 Gene

Localization for LOC100419814 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100419814 Gene

Pathways & Interactions for LOC100419814 Gene

SuperPathways for LOC100419814 Gene

No Data Available

Interacting Proteins for LOC100419814 Gene

Gene Ontology (GO) - Biological Process for LOC100419814 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100419814 Gene

Drugs & Compounds for LOC100419814 Gene

No Compound Related Data Available

Transcripts for LOC100419814 Gene

mRNA/cDNA for LOC100419814 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100419814 Gene

No ASD Table

Relevant External Links for LOC100419814 Gene

GeneLoc Exon Structure for
LOC100419814

Expression for LOC100419814 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100419814 Gene

genes like me logo Genes that share expression patterns with LOC100419814: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100419814 Gene

Orthologs for LOC100419814 Gene

Evolution for LOC100419814 Gene

ENSEMBL:
Gene Tree for LOC100419814 (if available)
TreeFam:
Gene Tree for LOC100419814 (if available)

No data available for Orthologs for LOC100419814 Gene

Paralogs for LOC100419814 Gene

No data available for Paralogs for LOC100419814 Gene

Variants for LOC100419814 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC100419814 Gene

Disorders for LOC100419814 Gene

No disorders were found for LOC100419814 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100419814 Gene

Publications for LOC100419814 Gene

No publications were found for LOC100419814 Gene.

Products for LOC100419814 Gene

Sources for LOC100419814 Gene

Content
Loading form....