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Aliases for LOC100419436 Gene

Aliases for LOC100419436 Gene

  • Ribosomal Protein S2 Pseudogene 3
  • AC087163.2 5

External Ids for LOC100419436 Gene

Previous GeneCards Identifiers for LOC100419436 Gene

  • GC17U901475
  • GC17P017914

Summaries for LOC100419436 Gene

GeneCards Summary for LOC100419436 Gene

LOC100419436 (Ribosomal Protein S2 Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100419436 Gene

Genomics for LOC100419436 Gene

Regulatory Elements for LOC100419436 Gene

Enhancers for LOC100419436 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G017689 2 FANTOM5 Ensembl ENCODE dbSUPER 21.2 -315.3 -315253 12.1 HDGF PKNOX1 FOXA2 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 YBX1 ZNF286B ENSG00000264885 LOC100419436 UPF3AP1 SREBF1 FOXO3B FAM106A USP32P2 ENSG00000273018 DRG2
GH17G017913 1.9 FANTOM5 Ensembl ENCODE dbSUPER 19.8 -96.4 -96365 1.6 PKNOX1 MLX ARID4B SIN3A FEZF1 ZNF2 FOS ZNF263 SP3 SP5 DRG2 FOXO3B ENSG00000264885 SMCR8 LOC100419436 RPL13P12 ZNF286B MPRIP-AS1 FAM106A RAI1
GH17G018718 1.6 Ensembl ENCODE dbSUPER 19.6 +709.9 709903 4.9 HDGF PKNOX1 ARID4B SIN3A ZNF2 ZNF143 ZNF207 ZNF416 FOS ZNF263 ENSG00000264885 LOC100419436 FAM106A TVP23B TRIM16L DRG2 FOXO3B ENSG00000273018 SMCR8 SNORD3B-1
GH17G017956 1.9 FANTOM5 Ensembl ENCODE dbSUPER 15.1 -52.0 -51986 4.5 PKNOX1 ARID4B SIN3A FEZF1 ZNF2 YY1 SLC30A9 ZNF143 FOS DEK TOM1L2 ENSG00000197815 LOC100419436 DRG2 ENSG00000264885 SMCR8 PIR37368
GH17G017748 2 FANTOM5 Ensembl ENCODE dbSUPER 14.3 -256.8 -256808 10.3 HDGF PKNOX1 ARNT WRNIP1 ARID4B SIN3A DMAP1 ZBTB7B YY1 ZNF143 ZNF286B USP32P2 ENSG00000264885 SMCR5 ENSG00000273018 LOC100419436 MPRIP-AS1 ENSG00000260647 TOM1L2 PEMT
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC100419436 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC100419436 Gene

Chromosome:
17
Start:
18,010,643 bp from pter
End:
18,011,826 bp from pter
Size:
1,184 bases
Orientation:
Plus strand

Genomic View for LOC100419436 Gene

Genes around LOC100419436 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100419436 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100419436 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100419436 Gene

Proteins for LOC100419436 Gene

Post-translational modifications for LOC100419436 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100419436 Gene

Domains & Families for LOC100419436 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100419436 Gene

Function for LOC100419436 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100419436 Gene

Localization for LOC100419436 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC100419436 Gene

Pathways & Interactions for LOC100419436 Gene

SuperPathways for LOC100419436 Gene

No Data Available

Interacting Proteins for LOC100419436 Gene

Gene Ontology (GO) - Biological Process for LOC100419436 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100419436 Gene

Drugs & Compounds for LOC100419436 Gene

No Compound Related Data Available

Transcripts for LOC100419436 Gene

mRNA/cDNA for LOC100419436 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100419436 Gene

No ASD Table

Relevant External Links for LOC100419436 Gene

GeneLoc Exon Structure for
LOC100419436

Expression for LOC100419436 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100419436 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100419436 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x4.2).
genes like me logo Genes that share expression patterns with LOC100419436: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100419436 Gene

Orthologs for LOC100419436 Gene

Evolution for LOC100419436 Gene

ENSEMBL:
Gene Tree for LOC100419436 (if available)
TreeFam:
Gene Tree for LOC100419436 (if available)

No data available for Orthologs for LOC100419436 Gene

Paralogs for LOC100419436 Gene

No data available for Paralogs for LOC100419436 Gene

Variants for LOC100419436 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC100419436 Gene

Disorders for LOC100419436 Gene

No disorders were found for LOC100419436 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100419436 Gene

Publications for LOC100419436 Gene

No publications were found for LOC100419436 Gene.

Products for LOC100419436 Gene

Sources for LOC100419436 Gene

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