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Aliases for LOC100288379 Gene

Aliases for LOC100288379 Gene

  • Ribosomal Protein S7 Pseudogene 3
  • AL691432.1 5

External Ids for LOC100288379 Gene

Previous GeneCards Identifiers for LOC100288379 Gene

  • GC00U927029
  • GC01P001602
  • GC01P000883

Summaries for LOC100288379 Gene

GeneCards Summary for LOC100288379 Gene

LOC100288379 (Ribosomal Protein S7 Pseudogene) is a Pseudogene.

Additional gene information for LOC100288379 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100288379 Gene

Genomics for LOC100288379 Gene

Regulatory Elements for LOC100288379 Gene

Enhancers for LOC100288379 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H001373 1.2 ENCODE 58 -296.9 -296867 3.9 MLX ZFP64 FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF143 SP3 NFYC ENSG00000230092 CDK11A ATAD3B LOC100288379 CCNL2 INTS11 ENSG00000237094 SDF4 ENSG00000240731 LOC100288069
GH01H000998 1.4 ENCODE dbSUPER 39.8 -671.4 -671351 3.5 MLX FEZF1 DMAP1 SLC30A9 ZNF143 SP3 NFYC ZC3H11A MEF2D SSRP1 INTS11 WASH7P ATAD3B ENSG00000240731 ENSG00000230092 CCNL2 CDK11A SLC35E2 LOC100288379 LOC100129381
GH01H002543 1.8 FANTOM5 ENCODE dbSUPER 26.8 +875.1 875097 7.5 HDGF PKNOX1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF766 CDK11A SLC35E2 LOC100129381 LOC100288379 MORN1 MMEL1 RER1 ENSG00000231630 ENSG00000233234 ENSG00000234396
GH01H001775 1.7 FANTOM5 ENCODE dbSUPER 26.4 +107.5 107536 8.6 HDGF PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A DMAP1 YY1 CBX5 NADK INTS11 ENSG00000240731 CCNL2 CDK11A LOC100288379 LOC105378949 SDF4 ENSG00000230092 ATAD3B
GH01H001071 1.4 Ensembl ENCODE dbSUPER 30.7 -598.8 -598769 3.5 TBP PKNOX1 NFIB SIN3A NFXL1 BMI1 ZBTB7B RFX5 EGR1 ZNF207 LOC100288379 CCNL2 ENSG00000230092 SDF4 CDK11A INTS11 MXRA8 ENSG00000240731 ENSG00000272512 SLC35E2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC100288379 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC100288379 Gene

Genomic Locations for LOC100288379 Gene
chr1:1,671,990-1,674,435
(GRCh38/hg38)
Size:
2,446 bases
Orientation:
Plus strand
chr1:1,604,714-1,605,836
(GRCh37/hg19)

Genomic View for LOC100288379 Gene

Genes around LOC100288379 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100288379 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100288379 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100288379 Gene

Proteins for LOC100288379 Gene

Post-translational modifications for LOC100288379 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100288379 Gene

Domains & Families for LOC100288379 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100288379 Gene

Function for LOC100288379 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100288379 Gene

Localization for LOC100288379 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC100288379 Gene

Pathways & Interactions for LOC100288379 Gene

SuperPathways for LOC100288379 Gene

No Data Available

Interacting Proteins for LOC100288379 Gene

Gene Ontology (GO) - Biological Process for LOC100288379 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100288379 Gene

Drugs & Compounds for LOC100288379 Gene

No Compound Related Data Available

Transcripts for LOC100288379 Gene

mRNA/cDNA for LOC100288379 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100288379 Gene

No ASD Table

Relevant External Links for LOC100288379 Gene

GeneLoc Exon Structure for
LOC100288379

Expression for LOC100288379 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100288379 Gene

genes like me logo Genes that share expression patterns with LOC100288379: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100288379 Gene

Orthologs for LOC100288379 Gene

Evolution for LOC100288379 Gene

ENSEMBL:
Gene Tree for LOC100288379 (if available)
TreeFam:
Gene Tree for LOC100288379 (if available)

No data available for Orthologs for LOC100288379 Gene

Paralogs for LOC100288379 Gene

No data available for Paralogs for LOC100288379 Gene

Variants for LOC100288379 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC100288379 Gene

Disorders for LOC100288379 Gene

No disorders were found for LOC100288379 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100288379 Gene

Publications for LOC100288379 Gene

No publications were found for LOC100288379 Gene.

Products for LOC100288379 Gene

Sources for LOC100288379 Gene

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