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Aliases for LOC100128093 Gene

Aliases for LOC100128093 Gene

  • Magnesium Transporter 1 Pseudogene 3
  • RP4-665N4.4 5

External Ids for LOC100128093 Gene

Previous GeneCards Identifiers for LOC100128093 Gene

  • GC01U901937
  • GC01M036319
  • GC01M036547
  • GC01M036548

Summaries for LOC100128093 Gene

GeneCards Summary for LOC100128093 Gene

LOC100128093 (Magnesium Transporter 1 Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC100128093 Gene

Genomics for LOC100128093 Gene

Regulatory Elements for LOC100128093 Gene

Enhancers for LOC100128093 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G036169 1.6 FANTOM5 Ensembl ENCODE dbSUPER 10.7 -90.6 -90622 10.1 BCOR CTCF MXI1 PTBP1 JUN ZSCAN4 ZMYM3 RBBP5 BMI1 ZIC2 MAP7D1 ENSG00000116883 COL8A2 ADPRHL2 TEKT2 LOC100128093 SH3D21 EVA1B LSM10 RNU4-27P
GH01G036299 1.6 Ensembl ENCODE dbSUPER 10.3 -219.8 -219758 8.8 HDGF PKNOX1 MLX ARNT AGO1 ARID4B SIN3A DMAP1 ZNF2 YY1 STK40 ENSG00000201448 OSCP1 MAP7D1 TRAPPC3 LSM10 RNU4-27P LOC100128093 TEKT2 ADPRHL2
GH01G036133 1.4 Ensembl ENCODE dbSUPER 11.5 -51.7 -51732 4.8 HDAC1 RB1 INSM2 RAD21 ZNF121 GATA2 ZNF143 FOS ZNF263 ZNF654 TRAPPC3 MAP7D1 ENSG00000271914 TFAP2E ADPRHL2 LOC100128093 TEKT2 AGO1 LSM10 COL8A2
GH01G036237 1.5 Ensembl ENCODE dbSUPER 10.4 -155.4 -155448 3.8 PKNOX1 FOXA2 MLX ARID4B DMAP1 ZNF2 ZNF143 KLF13 DEK PAF1 ENSG00000116883 COL8A2 MAP7D1 TRAPPC3 SH3D21 EVA1B ADPRHL2 LOC100128093 TEKT2 ENSG00000201448
GH01G036114 1.3 Ensembl ENCODE dbSUPER 11.9 -31.9 -31911 3.1 BCOR ZSCAN4 ZMYM3 ZIC2 ZNF48 ZNF664 E2F1 EGR1 POLR2A SMARCA5 TEKT2 ADPRHL2 LOC100128093 MAP7D1 TRAPPC3 LOC105378647 COL8A2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC100128093 on UCSC Golden Path with GeneCards custom track

Promoters for LOC100128093 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000004735 -174 801 CTCF MXI1 KLF1 RBBP5 EBF1 BMI1 ZIC2 GLIS2 POLR2A PATZ1

Genomic Location for LOC100128093 Gene

Chromosome:
1
Start:
36,080,066 bp from pter
End:
36,084,026 bp from pter
Size:
3,961 bases
Orientation:
Minus strand

Genomic View for LOC100128093 Gene

Genes around LOC100128093 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC100128093 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC100128093 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC100128093 Gene

Proteins for LOC100128093 Gene

Post-translational modifications for LOC100128093 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC100128093 Gene

Domains & Families for LOC100128093 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC100128093 Gene

Function for LOC100128093 Gene

Phenotypes for LOC100128093 Gene

GenomeRNAi human phenotypes for LOC100128093:
genes like me logo Genes that share phenotypes with LOC100128093: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC100128093 Gene

Localization for LOC100128093 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC100128093 Gene

Pathways & Interactions for LOC100128093 Gene

SuperPathways for LOC100128093 Gene

No Data Available

Interacting Proteins for LOC100128093 Gene

Gene Ontology (GO) - Biological Process for LOC100128093 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC100128093 Gene

Drugs & Compounds for LOC100128093 Gene

No Compound Related Data Available

Transcripts for LOC100128093 Gene

mRNA/cDNA for LOC100128093 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC100128093 Gene

No ASD Table

Relevant External Links for LOC100128093 Gene

GeneLoc Exon Structure for
LOC100128093

Expression for LOC100128093 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC100128093 Gene

mRNA differential expression in normal tissues according to GTEx for LOC100128093 Gene

This gene is overexpressed in Testis (x33.2).
genes like me logo Genes that share expression patterns with LOC100128093: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC100128093 Gene

Orthologs for LOC100128093 Gene

Evolution for LOC100128093 Gene

ENSEMBL:
Gene Tree for LOC100128093 (if available)
TreeFam:
Gene Tree for LOC100128093 (if available)

No data available for Orthologs for LOC100128093 Gene

Paralogs for LOC100128093 Gene

No data available for Paralogs for LOC100128093 Gene

Variants for LOC100128093 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC100128093 Gene

Disorders for LOC100128093 Gene

No disorders were found for LOC100128093 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC100128093 Gene

Publications for LOC100128093 Gene

No publications were found for LOC100128093 Gene.

Products for LOC100128093 Gene

Sources for LOC100128093 Gene

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