LMNA Gene
protein-coding GIFtS : 71
GCID: GC01 P156053
lamin A/C (Previous names: cardiomyopathy, dilated 1A (autosomal dominant), limb girdle... ) (Previous symbols: LMN1, CMD1A, LGMD1B, PRO1, LMNL1 )
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Aliasesfor LMNA gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Lamin A/C 1 2 70 KDa Lamin2 LMN11 2 3 5 CDCD12 CMD1A1 2 5 CDDC2 HGPS1 2 5 CMT2B12 LGMD1B1 2 5 FPL2 LMNL11 2 FPLD22 PRO11 2 IDC2 Lamin A/C-Like 11 2 LDP12 EMD22 5 LFP2 FPLD2 5 LMNC2 Cardiomyopathy, Dilated 1A (Autosomal Dominant)1 Lamin1 Limb Girdle Muscular Dystrophy 1B (Autosomal Dominant)1 Prelamin-A/C1 Progeria 1 (Hutchinson-Gilford Type)1 Renal Carcinoma Antigen NY-REN-322
Export aliases for LMNA gene to outside databases Previous GC identifers: GC01P153921 GC01P151817 GC01P152830 GC01P153301 GC01P152897 GC01P154318 GC01P127446
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Summariesfor LMNA gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for LMNA : The nuclear lamina consists of a two-dimensional matrix of proteins located next to the inner nuclear membrane. The lamin family of proteins make up the matrix and are highly conserved in evolution. During mitosis, the lamina matrix is reversibly disassembled as the lamin proteins are phosphorylated. Lamin proteins are thought to be involved in nuclear stability, chromatin structure and gene expression. Vertebrate lamins consist of two types, A and B. Alternative splicing results in multiple transcript variants. Mutations in this gene lead to several diseases: Emery-Dreifuss muscular dystrophy, familial partial lipodystrophy, limb girdle muscular dystrophy, dilated cardiomyopathy, Charcot-Marie-Tooth disease, and Hutchinson-Gilford progeria syndrome. (provided by RefSeq, Apr 2012) UniProtKB/Swiss-Prot: LMNA_HUMAN, P02545 Function : Lamins are components of the nuclear lamina, a fibrous layer on the nucleoplasmic side of the inner nuclearmembrane, which is thought to provide a framework for the nuclear envelope and may also interact with chromatin. Lamin A and C are present in equal amounts in the lamina of mammals. Plays an important role in nuclear assembly, chromatin organization, nuclear membrane and telomere dynamics Function : Prelamin-A/C can accelerate smooth muscle cell senescence. It acts to disrupt mitosis and induce DNA damagein vascular smooth muscle cells (VSMCs), leading to mitotic failure, genomic instability, and premature senescence Gene Wiki entry for LMNA
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Genomic Viewsfor LMNA gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000001.10 NC_018912.1 NT_004487.19 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the LMNA gene promoter: STAT1 STAT1beta STAT1alpha Other transcription factors Search SABiosciences Chromatin IP Primers for LMNA Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat LMNA
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 1q22 Ensembl cytogenetic band: 1q22 HGNC cytogenetic band: 1q22 LMNA Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 1 GeneLoc Exon Structure
GeneLoc location for GC01P156053: view genomic region
(about GC identifiers )
Start:
156,052,364 bp from pter
End:
156,109,880 bp from pter
Size:
57,517 bases
Orientation:
plus strand
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Proteinsfor LMNA gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: LMNA_HUMAN, P02545 (See
protein sequence )Recommended Name: Prelamin-A/C precursor Size : 664 amino acids; 74139 Da
Subunit : Homodimer of lamin A and lamin C. Interacts with lamin-associated polypeptides IA, IB and TMPO-alpha, RB1 andwith emerin. Interacts with SREBF1, SREBF2, SUN2 and TMEM43 (By similarity). Proteolytically processed isoform A interacts with NARF. Interacts with SUN1. Prelamin-A/C interacts with EMD. Interacts with MLIP; may regulate MLIP localization to the nucleus envelope. Interacts with DMPK; may regulate nuclear envelope stability
Subcellular location : Nucleus. Nucleus envelope. Note=Farnesylation of prelamin-A/C facilitates nuclear envelopetargeting and subsequent cleaveage by ZMPSTE24/FACE1 to remove the farnesyl group produces mature lamin-A/C, which can then be inserted into the nuclear lamina. EMD is required for proper localization of non-farnesylated prelamin-A/C
Miscellaneous : There are three types of lamins in human cells: A, B, and C
Miscellaneous : The structural integrity of the lamina is strictly controlled by the cell cycle, as seen by thedisintegration and formation of the nuclear envelope in prophase and telophase, respectively
Sequence caution : Sequence=CAA27173.1; Type=Frameshift; Positions=582;
6/8 PDB 3D structures from and Proteopedia for LMNA (see all 8 ):1IFR (3D)
  1IVT (3D)
  1X8Y (3D)
  2XV5 (3D)
  3GEF (3D)
  3V4Q (3D)
 
Secondary accessions : B4DI32 D3DVB0 E7EUI9 P02546 Q5TCJ2 Q5TCJ3 Q969I8 Q96JA2Alternative splicing : 4 isoforms : P02545-1 P02545-2 P02545-3 P02545-4 (No experimental confirmation available. Ref.3 (BAG58344) sequence is in conflict in position: 556:G->R)Explore the universe of human proteins at neXtProt for LMNA: NX_P02545 Post-translational modifications:
Increased phosphorylation of the lamins occurs before envelope disintegration and probably plays a role in regulating lamin associations1
Proteolytic cleavage of the C-terminal of 18 residues of prelamin-A/C results in the production of lamin-A/C. The prelamin-A/C maturation pathway includes farnesylation of CAAX motif, ZMPSTE24/FACE1 mediated cleavage of the last three amino acids, methylation of the C-terminal cysteine and endoproteolytic removal of the last 15 C-terminal amino acids. Proteolytic cleavage requires prior farnesylation and methylation, and absence of these blocks cleavage1
Sumoylation is necessary for the localization to the nuclear envelope1
Farnesylation of prelamin-A/C facilitates nuclear envelope targeting1
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P02545 LMNA Protein expression data from MOPED and PaxDb : About this image REFSEQ proteins (4 alternative transcripts):
NP_001244303.1 NP_005563.1 NP_733821.1 NP_733822.1 ENSEMBL proteins: ENSP00000357284 ENSP00000357283 ENSP00000357282 ENSP00000395597 ENSP00000424518 ENSP00000357280 ENSP00000426535 ENSP00000421821 ENSP00000424977 ENSP00000292304 ENSP00000355292 ENSP00000376164 Reactome Protein details: P02545 Human Recombinant Protein Products for LMNA: Gene Ontology (GO): 5/10 cellular component terms (GO ID links to tree view) (see all 10 ): About this table
LMNA for ontologies About GeneDecksing LMNA Antibody Products: Assay Products for LMNA:
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Protein
Domains / Familiesfor LMNA gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
LMNA for domains About GeneDecksing 4 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P02545 ProtoNet protein and cluster: P02545
2 Blocks protein families : IPB001322 Intermediate filament IPB001664 Intermediate filament protein UniProtKB/Swiss-Prot: LMNA_HUMAN, P02545 Similarity : Belongs to the intermediate filament family
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Functionfor LMNA gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory ,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase ,
shRNA from
OriGene ,
Sirion Biotech ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Sirion Biotech ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
Sirion Biotech ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Molecular Function: UniProtKB/Swiss-Prot Summary: LMNA_HUMAN, P02545 Function : Lamins are components of the nuclear lamina, a fibrous layer on the nucleoplasmic side of the inner nuclearmembrane, which is thought to provide a framework for the nuclear envelope and may also interact with chromatin. Lamin A and C are present in equal amounts in the lamina of mammals. Plays an important role in nuclear assembly, chromatin organization, nuclear membrane and telomere dynamics Function : Prelamin-A/C can accelerate smooth muscle cell senescence. It acts to disrupt mitosis and induce DNA damagein vascular smooth muscle cells (VSMCs), leading to mitotic failure, genomic instability, and premature senescence
Genatlas biochemistry entry for LMNA : lamin,types A and C,common gene,alternatively spliced isoforms Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view) : About this table
LMNA for ontologies About GeneDecksing Phenotypes: 3 GenomeRNAi human phenotypes for LMNA : 15/25 MGI mutant phenotypes (inferred from 16 alleles ) (MGI details for Lmna) (see all 25 ):
LMNA for phenotypes About GeneDecksing Animal Models: Mouse knock-outs for LMNA: Lmna tm6Lgf Lmna tm1Stw Lmna tm4Lgf Lmna tm5Lgf Lmna tm1Lgf Lmna tm2Lgf Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for LMNA (see all 7 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for LMNA (see all 3 )OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 3 ): LMNA (NM_170707 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for LMNA Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat LMNA
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for LMNA
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Pathways & Interactionsfor LMNA gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/20 super-pathways (see all 20 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Apoptosis and survival_Caspase cascade 2 Clearance of Nuclear Envelope Membranes from Chromatin 3 M Phase 4 Meiotic Synapsis 5 Activation of Chaperone Genes by XBP1(S)
Pathway sources See GeneCards unified pathways Show all pathways 2 EMD Millipore Pathways for LMNA 3 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for LMNA 3
Cell Signaling Technology (CST) Pathways for LMNA 2 GeneGo (Thomson Reuters) Pathways for LMNA 4 BioSystems Pathways for LMNA 5/24
Reactome Pathways for LMNA (see all 24 )1 PharmGKB Pathway for LMNA 3
Kegg Pathways (Kegg details for LMNA) :
LMNA for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for LMNA STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/921 Interacting proteins for LMNA (P02545 1 , 2 , 3 ENSP00000357283 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 921 )About this table Gene Ontology (GO): 5/16 biological process terms (GO ID links to tree view) (see all 16 ): About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0006915 apoptotic process
TAS -- GO:0006921 cellular component disassembly involved in execution phase of apoptosis
TAS -- GO:0006987 activation of signaling protein activity involved in unfolded protein response
TAS -- GO:0006997 nucleus organization
-- -- GO:0006998 nuclear envelope organization
IEA --
LMNA for ontologies About GeneDecksing
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Drugs & Compoundsfor LMNA gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
LMNA for compounds About GeneDecksing Browse Tocris compounds for LMNA 10/18 Novoseek chemical compound relationships for LMNA gene (see all 18 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
nelfinavir
23.7
2
14600514 (1), 18344876 (1)
rosiglitazone
18
2
14510863 (2)
indinavir
17.1
4
14600514 (1), 16184025 (1), 12844477 (1)
zinc
14.2
12
16278265 (1), 19494770 (1), 19323649 (1), 15998779 (1) (see all 7 )
retinoic acid
12.4
18
15219855 (3), 10694499 (3), 12844477 (2), 11478838 (1) (see all 8 )
deoxyribonucleic acid
6.22
1
12015247 (1)
calcium
0.975
2
1467310 (1), 19144047 (1)
cholesterol
0
4
11136544 (1), 12524233 (1), 17994215 (1), 15205219 (1)
atp
0
6
1965140 (2), 15892163 (1), 2004657 (1)
lipid
0
3
20130076 (2), 16181372 (1)
Search CenterWatch for drugs/clinical trials and news about LMNA
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Transcriptsfor LMNA gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
Sirion Biotech ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for LMNA gene (4 alternative transcripts): NM_001257374.1 NM_005572.3 NM_170707.3 NM_170708.3 Unigene Cluster for LMNA:
Lamin A/C Hs.594444 [show with all ESTs ] Unigene Representative Sequence: NM_170707 18/26 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 26 ): ENST00000502751 ENST00000368301 (uc001fnf.1 ) ENST00000495341 ENST00000470835 ENST00000515711 ENST00000368300 (uc001fng.2 uc001fni.2 uc009wro.1 uc001fnk.2 )ENST00000470199 ENST00000478063 ENST00000469565 ENST00000368299 ENST00000502357 ENST00000448611 (uc010pgz.1 ) ENST00000515459 ENST00000368297 ENST00000504687 ENST00000473598 ENST00000515824 ENST00000496738 (uc001fnj.2 uc010pha.1 )Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for LMNA (see all 7 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for LMNA (see all 3 )OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 3 ): LMNA (NM_170707 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for LMNA Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat LMNA
Additional cDNA sequence: AF381029.1 AK026584.1 AK056143.1 AK056191.1 AK057997.1 AK097801.1 AK098128.1 AK122732.1 AK130179.1 AK294217.1 AK295390.1 AK309539.1 AY357727.1 AY528714.1 AY847595.1 AY847596.1 AY847597.1 BC000511.2 BC003162.1 BC014507.1 BC018863.2 BC033088.1 M13451.1 M13452.1 NR_047544.1 NR_047545.1 X03444.1 X03445.1
24/79 DOTS entries (see all 79 ): DT.100891747 DT.91871177
DT.92469899 DT.95246279 DT.100891714 DT.95294580 DT.100891710 DT.121347135 DT.100891740 DT.92469913 DT.100891733 DT.92057489 DT.101986435 DT.121347131 DT.121347084 DT.100891726 DT.95322263 DT.99987681 DT.121347143 DT.121347120 DT.100891698 DT.100039687 DT.100891751 DT.320389 24/1597 AceView cDNA sequences (see all 1597 ):
BG260177 CA395830 CA423881 CB528890 CB138659 BE408991 W23629 BU542321 AU139796 BE336696 CA406353 CA841908 BU174781 CB130594 AI219557 BQ686823 BE902429 BM795146 BE885040 BE273844 BQ431561 CB152958 CD367718 BQ933009 GeneLoc Exon Structure 4 Alternative Splicing Database (ASD) splice patterns (SP) for LMNA About this scheme ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10a · 10b ^ 11a · 11b ^ 12a · 12b · 12c SP1 :               -             -             SP2 :               -             -     -         SP3 :               -                         SP4 :                                      
ECgene alternative splicing isoforms for LMNA
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Expression for LMNA gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section LMNA expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GGAGGGGGCTAbout this image LMNA expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table
See LMNA Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for LMNA SOURCE GeneReport for Unigene cluster: Hs.594444 UniProtKB/Swiss-Prot: LMNA_HUMAN, P02545 Tissue specificity : In the arteries, prelamin-A/C accumulation is not observed in young healthy vessels but isprevalent in medial vascular smooth muscle cells (VSMCs) from aged individuals and in atherosclerotic lesions, where it often colocalizes with senescent and degenerate VSMCs. Prelamin-A/C expression increases with age and disease. In normal aging, the accumulation of prelamin-A/C is caused in part by the down-regulation of ZMPSTE24/FACE1 in response to oxidative stress SABiosciences Expression via Pathway-Focused PCR Arrays including LMNA : Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for LMNABrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat LMNA QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat LMNA QIAGEN QuantiFast Probe-based Assays in human , mouse , rat LMNA In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for LMNA
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Orthologsfor LMNA gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for LMNA gene from 4/19 species (see all 19 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
lizard (Anolis carolinensis)
Reptilia
----
--
73(a) 55(a)
1 ↔ many1 ↔ many
GL344336.1(8415-20568) 2(41214999-41216574)
African clawed frog (Xenopus laevis)
Amphibia
lmna-A2
lamin A/C
76.67(n)
 
X06345.1
zebrafish (Danio rerio)
Actinopterygii
lmna2
lamin A
76.11(n)
 
195815 AF397016.1
fruit fly (Drosophila melanogaster)
Insecta
LamC3
nuclear envelope reassembly
37(a) (best of 2)
 
51B1 --
ENSEMBL Gene Tree for LMNA (if available)TreeFam Gene Tree for LMNA (if available)
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Paralogsfor LMNA gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for LMNA gene LMNB1 2 SYNM 2 VIM 2 INA 2 NES 2 PRPH 2 DES 2 NEFM 2 LMNB2 2 NEFH 2 GFAP 2 5 SIMAP similar genes for LMNA using alignment to 9 protein entries: LMNA_HUMAN (see all proteins ):LMNB1 LMNB2 VIM KRT5 keratin
LMNA for paralogs About GeneDecksing
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Genomic Variantsfor LMNA gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
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Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 1 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More