Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LINC02531 Gene

Subcategory (RNA class) for LINC02531 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC02531 Gene

  • Long Intergenic Non-Protein Coding RNA 2531 2 3 5

External Ids for LINC02531 Gene

Summaries for LINC02531 Gene

GeneCards Summary for LINC02531 Gene

LINC02531 (Long Intergenic Non-Protein Coding RNA 2531) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02531 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02531 Gene

Genomics for LINC02531 Gene

Regulatory Elements for LINC02531 Gene

Enhancers for LINC02531 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H092706 0.4 ENCODE 0.4 +16.3 16288 1.6 JUND FOS LINC02531 PIR36844
GH06H092672 0.3 FANTOM5 0.2 +51.6 51639 0.2 PIR36844 LINC02531
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LINC02531 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02531 Gene

Genomic Locations for LINC02531 Gene
chr6:92,723,003-92,723,829
(GRCh38/hg38)
Size:
827 bases
Orientation:
Minus strand
chr6:93,432,721-93,433,547
(GRCh37/hg19)

Genomic View for LINC02531 Gene

Genes around LINC02531 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02531 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02531 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02531 Gene

Proteins for LINC02531 Gene

Post-translational modifications for LINC02531 Gene

No Post-translational modifications

Other Protein References for LINC02531 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LINC02531 Gene

Domains & Families for LINC02531 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02531 Gene

Function for LINC02531 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02531 Gene

Localization for LINC02531 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02531 Gene

Pathways & Interactions for LINC02531 Gene

SuperPathways for LINC02531 Gene

No Data Available

Interacting Proteins for LINC02531 Gene

Gene Ontology (GO) - Biological Process for LINC02531 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02531 Gene

Drugs & Compounds for LINC02531 Gene

No Compound Related Data Available

Transcripts for LINC02531 Gene

mRNA/cDNA for LINC02531 Gene

(2) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02531 Gene

No ASD Table

Relevant External Links for LINC02531 Gene

GeneLoc Exon Structure for
LINC02531
ECgene alternative splicing isoforms for
LINC02531

Expression for LINC02531 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02531 Gene

Orthologs for LINC02531 Gene

Evolution for LINC02531 Gene

ENSEMBL:
Gene Tree for LINC02531 (if available)
TreeFam:
Gene Tree for LINC02531 (if available)

No data available for Orthologs for LINC02531 Gene

Paralogs for LINC02531 Gene

No data available for Paralogs for LINC02531 Gene

Variants for LINC02531 Gene

Sequence variations from dbSNP and Humsavar for LINC02531 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1000209530 -- 92,721,344(+) AGAAT(C/T)TAAAG downstream-variant-500B
rs1000338942 -- 92,724,907(+) CAAAG(C/T)CCGGA intron-variant
rs1000370015 -- 92,725,037(+) GAAAG(C/T)TTTAG intron-variant
rs1000697165 -- 92,725,889(+) CCTGG(C/G)ATAGA upstream-variant-2KB
rs1001132417 -- 92,725,740(+) AGTAG(A/C)GACGG upstream-variant-2KB

Relevant External Links for LINC02531 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02531

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02531 Gene

Disorders for LINC02531 Gene

No disorders were found for LINC02531 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02531 Gene

Publications for LINC02531 Gene

No publications were found for LINC02531 Gene.

Products for LINC02531 Gene

Sources for LINC02531 Gene

Content
Loading form....