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Aliases for LINC02528 Gene

Subcategory (RNA class) for LINC02528 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC02528 Gene

  • Long Intergenic Non-Protein Coding RNA 2528 2 3 5

External Ids for LINC02528 Gene

Summaries for LINC02528 Gene

GeneCards Summary for LINC02528 Gene

LINC02528 (Long Intergenic Non-Protein Coding RNA 2528) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02528 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02528 Gene

Genomics for LINC02528 Gene

Regulatory Elements for LINC02528 Gene

Enhancers for LINC02528 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H138084 1.6 Ensembl ENCODE dbSUPER 14.7 -130.4 -130359 7.1 PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 LINC02528 PERP LOC105378021
GH06H138029 1.5 FANTOM5 ENCODE dbSUPER 14.7 -75.8 -75815 7 PKNOX1 NFIB KLF17 FEZF1 BATF RAD21 FOS ZNF391 SP5 ELF1 LINC02528 PERP LOC105378021 RPSAP42
GH06H137665 1 dbSUPER 14.6 +291.5 291502 1.9 PKNOX1 ARNT FEZF1 ZNF2 ZNF302 ATF7 KLF7 YY2 JUNB REST LINC02528 LOC102723649 LOC105378018
GH06H137958 1.1 FANTOM5 Ensembl dbSUPER 0.7 -1.5 -1490 0.9 POLR2A CEBPB MAX CEBPG TNFAIP3 LINC02528 RPSAP42
GH06H137967 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -10.8 -10828 1.8 HDAC1 LEF1 ATF1 TBL1XR1 ARNT TAL1 CEBPG FOSL1 IRF9 TCF12 TNFAIP3 LINC02528 RPSAP42
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LINC02528 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC02528 Gene

Genomic Locations for LINC02528 Gene
chr6:137,945,042-137,957,661
(GRCh38/hg38)
Size:
12,620 bases
Orientation:
Minus strand
chr6:138,266,503-138,293,659
(GRCh37/hg19)

Genomic View for LINC02528 Gene

Genes around LINC02528 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02528 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02528 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02528 Gene

Proteins for LINC02528 Gene

Post-translational modifications for LINC02528 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02528 Gene

Domains & Families for LINC02528 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02528 Gene

Function for LINC02528 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02528 Gene

Localization for LINC02528 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02528 Gene

Pathways & Interactions for LINC02528 Gene

SuperPathways for LINC02528 Gene

No Data Available

Interacting Proteins for LINC02528 Gene

Gene Ontology (GO) - Biological Process for LINC02528 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02528 Gene

Drugs & Compounds for LINC02528 Gene

No Compound Related Data Available

Transcripts for LINC02528 Gene

mRNA/cDNA for LINC02528 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02528 Gene

No ASD Table

Relevant External Links for LINC02528 Gene

GeneLoc Exon Structure for
LINC02528
ECgene alternative splicing isoforms for
LINC02528

Expression for LINC02528 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02528 Gene

Orthologs for LINC02528 Gene

Evolution for LINC02528 Gene

ENSEMBL:
Gene Tree for LINC02528 (if available)
TreeFam:
Gene Tree for LINC02528 (if available)

No data available for Orthologs for LINC02528 Gene

Paralogs for LINC02528 Gene

No data available for Paralogs for LINC02528 Gene

Variants for LINC02528 Gene

Sequence variations from dbSNP and Humsavar for LINC02528 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1000150202 -- 137,950,674(+) AGGTC(A/G)GGTAT intron-variant
rs1000296940 -- 137,959,194(+) TAAAC(A/C)ATTAA upstream-variant-2KB
rs1000364714 -- 137,947,438(+) TCATT(G/T)GTTGA intron-variant
rs1000392129 -- 137,947,398(+) ATTGT(C/T)TACTT intron-variant
rs1000527859 -- 137,951,612(+) TAGTG(G/T)ACTGC intron-variant

Relevant External Links for LINC02528 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02528

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02528 Gene

Disorders for LINC02528 Gene

No disorders were found for LINC02528 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02528 Gene

Publications for LINC02528 Gene

No publications were found for LINC02528 Gene.

Products for LINC02528 Gene

Sources for LINC02528 Gene

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