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Aliases for LINC02363 Gene

Subcategory (RNA class) for LINC02363 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC02363 Gene

  • Long Intergenic Non-Protein Coding RNA 2363 2 3 5

External Ids for LINC02363 Gene

Summaries for LINC02363 Gene

GeneCards Summary for LINC02363 Gene

LINC02363 (Long Intergenic Non-Protein Coding RNA 2363) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC02363 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02363 Gene

Genomics for LINC02363 Gene

Regulatory Elements for LINC02363 Gene

Enhancers for LINC02363 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H184342 2 FANTOM5 Ensembl ENCODE dbSUPER 22 +7.5 7506 8 HDGF PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 YY1 ZNF766 ZNF143 LINC02363 IRF2 ENSG00000251878 CASP3 PRIMPOL CFAP97 ACSL1 GC04P184303
GH04H184353 1.9 FANTOM5 Ensembl ENCODE dbSUPER 18.3 -2.1 -2113 4 HDGF PKNOX1 FOXA2 SIN3A ARID4B YY1 ZNF766 ZNF143 ZNF207 REST PRIMPOL LINC02363 IRF2 SNX25 CDKN2AIP ENSG00000251878 CFAP97 ACSL1 ENSG00000248206 LINC02362
GH04H184326 1.9 FANTOM5 Ensembl ENCODE dbSUPER 16.3 +24.0 24004 6 HDGF PKNOX1 FOXA2 TBL1XR1 SIN3A BMI1 BATF RAD21 ZSCAN9 YY1 LINC02363 MYL12BP2 ACSL1 IRF2 GC04P184303
GH04H184265 1.9 FANTOM5 Ensembl ENCODE dbSUPER 9.8 +86.7 86685 3 HDGF PKNOX1 ATF1 SIN3A ARID4B ZNF766 ZNF143 FOS ATF7 RUNX3 IRF2 MYL12BP2 CASP3 TRAPPC11 ENSG00000251878 PRIMPOL LINC02363 LOC105377584 RN7SL28P
GH04H184280 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10 +71.5 71530 4 HDGF TBP PKNOX1 FOXA2 TBL1XR1 SIN3A BMI1 BATF RAD21 YY1 MYL12BP2 ENSG00000251878 LINC02363 ENPP6 CENPU CASP3 IRF2 RN7SL28P LOC105377582
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LINC02363 on UCSC Golden Path with GeneCards custom track

Genomic Location for LINC02363 Gene

Chromosome:
4
Start:
184,340,756 bp from pter
End:
184,353,977 bp from pter
Size:
13,222 bases
Orientation:
Minus strand

Genomic View for LINC02363 Gene

Genes around LINC02363 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02363 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02363 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02363 Gene

Proteins for LINC02363 Gene

Post-translational modifications for LINC02363 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02363 Gene

Domains & Families for LINC02363 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02363 Gene

Function for LINC02363 Gene

Phenotypes From GWAS Catalog for LINC02363 Gene

Phenotypes for LINC02363 Gene

GenomeRNAi human phenotypes for LINC02363:
genes like me logo Genes that share phenotypes with LINC02363: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02363 Gene

Localization for LINC02363 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC02363 Gene

Pathways & Interactions for LINC02363 Gene

SuperPathways for LINC02363 Gene

No Data Available

Interacting Proteins for LINC02363 Gene

Gene Ontology (GO) - Biological Process for LINC02363 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02363 Gene

Drugs & Compounds for LINC02363 Gene

No Compound Related Data Available

Transcripts for LINC02363 Gene

mRNA/cDNA for LINC02363 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02363 Gene

No ASD Table

Relevant External Links for LINC02363 Gene

GeneLoc Exon Structure for
LINC02363
ECgene alternative splicing isoforms for
LINC02363

Expression for LINC02363 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02363 Gene

Orthologs for LINC02363 Gene

Evolution for LINC02363 Gene

ENSEMBL:
Gene Tree for LINC02363 (if available)
TreeFam:
Gene Tree for LINC02363 (if available)

No data available for Orthologs for LINC02363 Gene

Paralogs for LINC02363 Gene

No data available for Paralogs for LINC02363 Gene

Variants for LINC02363 Gene

Sequence variations from dbSNP and Humsavar for LINC02363 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1000286132 -- 184,345,661(+) CCAAA(A/G)CCAGA intron-variant
rs1000343973 -- 184,351,137(+) GAAAT(C/G)TCATA intron-variant
rs1000396392 -- 184,351,242(+) CATTA(C/G/T)TCTAA intron-variant
rs1000897354 -- 184,342,851(+) ATACA(A/C)AAATT intron-variant
rs1000897798 -- 184,347,237(+) CTTTA(C/T)AACAG intron-variant

Relevant External Links for LINC02363 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02363

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02363 Gene

Disorders for LINC02363 Gene

Relevant External Links for LINC02363

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LINC02363

No disorders were found for LINC02363 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC02363 Gene

Publications for LINC02363 Gene

  1. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T … Vidal M (Cell 2014) 3 60
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60
  4. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 60

Products for LINC02363 Gene

Sources for LINC02363 Gene

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