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Aliases for LINC02195 Gene

Subcategory (RNA class) for LINC02195 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC02195 Gene

  • Long Intergenic Non-Protein Coding RNA 2195 2 3 5

External Ids for LINC02195 Gene

Summaries for LINC02195 Gene

GeneCards Summary for LINC02195 Gene

LINC02195 (Long Intergenic Non-Protein Coding RNA 2195) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC02195 Gene

Genomics for LINC02195 Gene

Regulatory Elements for LINC02195 Gene

Enhancers for LINC02195 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G026597 1 FANTOM5 ENCODE 8.2 -3.4 -3376 2.5 ZBTB21 JUN CEBPG FOSL1 FOS TRIM24 SMARCE1 RFX1 NR4A1 CEBPB LINC02195 GC16P026669
GH16G026593 0.4 FANTOM5 0.7 +1.6 1613 0.2 HLF LINC02195 GC16M026572
GH16G026606 0.4 FANTOM5 0.4 -10.7 -10713 0.2 EP300 LINC02195 GC16P026669
GH16G026614 0.3 FANTOM5 0.4 -19.2 -19160 0.2 LINC02195 GC16P026669
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LINC02195 on UCSC Golden Path with GeneCards custom track

Genomic Location for LINC02195 Gene

Chromosome:
16
Start:
26,584,755 bp from pter
End:
26,595,452 bp from pter
Size:
10,698 bases
Orientation:
Minus strand

Genomic View for LINC02195 Gene

Genes around LINC02195 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC02195 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC02195 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC02195 Gene

Proteins for LINC02195 Gene

Post-translational modifications for LINC02195 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC02195 Gene

Domains & Families for LINC02195 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC02195 Gene

Function for LINC02195 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC02195 Gene

Localization for LINC02195 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC02195 Gene

Pathways & Interactions for LINC02195 Gene

SuperPathways for LINC02195 Gene

No Data Available

Interacting Proteins for LINC02195 Gene

Gene Ontology (GO) - Biological Process for LINC02195 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC02195 Gene

Drugs & Compounds for LINC02195 Gene

No Compound Related Data Available

Transcripts for LINC02195 Gene

mRNA/cDNA for LINC02195 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC02195 Gene

No ASD Table

Relevant External Links for LINC02195 Gene

GeneLoc Exon Structure for
LINC02195
ECgene alternative splicing isoforms for
LINC02195

Expression for LINC02195 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC02195 Gene

Orthologs for LINC02195 Gene

Evolution for LINC02195 Gene

ENSEMBL:
Gene Tree for LINC02195 (if available)
TreeFam:
Gene Tree for LINC02195 (if available)

No data available for Orthologs for LINC02195 Gene

Paralogs for LINC02195 Gene

No data available for Paralogs for LINC02195 Gene

Variants for LINC02195 Gene

Sequence variations from dbSNP and Humsavar for LINC02195 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs1000306108 -- 26,588,311(+) CCTTT(A/T)TATTT intron-variant
rs1000373377 -- 26,588,533(+) TTCCA(C/T)ACAAT intron-variant
rs1000374113 -- 26,586,025(+) TTCCT(C/T)TCTTG intron-variant
rs1000500072 -- 26,595,817(+) GCGCC(A/T)GGCCC upstream-variant-2KB
rs1000577289 -- 26,594,576(+) AGTTT(C/G)AGCAT intron-variant

Relevant External Links for LINC02195 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC02195

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC02195 Gene

Disorders for LINC02195 Gene

No disorders were found for LINC02195 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC02195 Gene

Publications for LINC02195 Gene

No publications were found for LINC02195 Gene.

Products for LINC02195 Gene

Sources for LINC02195 Gene

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