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Aliases for LINC01807 Gene

Subcategory (RNA class) for LINC01807 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01807 Gene

  • Long Intergenic Non-Protein Coding RNA 1807 2 3 5

External Ids for LINC01807 Gene

Summaries for LINC01807 Gene

GeneCards Summary for LINC01807 Gene

LINC01807 (Long Intergenic Non-Protein Coding RNA 1807) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01807 Gene

Genomics for LINC01807 Gene

Genomic Location for LINC01807 Gene

Chromosome:
2
Start:
228,475,164 bp from pter
End:
228,744,681 bp from pter
Size:
269,518 bases
Orientation:
Minus strand

Genomic View for LINC01807 Gene

Genes around LINC01807 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01807 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01807 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01807 Gene

No data available for Regulatory Elements for LINC01807 Gene

Proteins for LINC01807 Gene

Post-translational modifications for LINC01807 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01807 Gene

Domains & Families for LINC01807 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01807 Gene

Function for LINC01807 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01807 Gene

Localization for LINC01807 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01807 Gene

Pathways & Interactions for LINC01807 Gene

SuperPathways for LINC01807 Gene

No Data Available

Interacting Proteins for LINC01807 Gene

Gene Ontology (GO) - Biological Process for LINC01807 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01807 Gene

Drugs & Compounds for LINC01807 Gene

No Compound Related Data Available

Transcripts for LINC01807 Gene

mRNA/cDNA for LINC01807 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01807 Gene

No ASD Table

Relevant External Links for LINC01807 Gene

GeneLoc Exon Structure for
LINC01807
ECgene alternative splicing isoforms for
LINC01807

Expression for LINC01807 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01807 Gene

Orthologs for LINC01807 Gene

Evolution for LINC01807 Gene

ENSEMBL:
Gene Tree for LINC01807 (if available)
TreeFam:
Gene Tree for LINC01807 (if available)

No data available for Orthologs for LINC01807 Gene

Paralogs for LINC01807 Gene

No data available for Paralogs for LINC01807 Gene

Variants for LINC01807 Gene

Sequence variations from dbSNP and Humsavar for LINC01807 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000003113 -- 228,487,020(+) AGTCC(C/T)CAGTG intron-variant
rs1000059763 -- 228,528,419(+) TTTAA(A/C)AGAAA intron-variant, nc-transcript-variant
rs1000072215 -- 228,508,822(+) AATAG(C/T)ATCAC intron-variant
rs1000078847 -- 228,550,090(+) GGGTG(C/T)ATTGG intron-variant
rs1000110846 -- 228,570,796(+) GAACT(C/G)TCCAC intron-variant

Relevant External Links for LINC01807 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01807

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01807 Gene

Disorders for LINC01807 Gene

No disorders were found for LINC01807 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC01807 Gene

Publications for LINC01807 Gene

  1. Genome-wide association study of endometrial cancer in E2C2. (PMID: 24096698) De Vivo I. … Kraft P. (Hum. Genet. 2014) 3 64
  2. Genome-wide joint meta-analysis of SNP and SNP-by-smoking interaction identifies novel loci for pulmonary function. (PMID: 23284291) Hancock D.B. … London S.J. (PLoS Genet. 2012) 3 64

Products for LINC01807 Gene

Sources for LINC01807 Gene

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