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Aliases for LINC01761 Gene

Subcategory (RNA class) for LINC01761 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01761 Gene

  • Long Intergenic Non-Protein Coding RNA 1761 2 3
  • Uncharacterized LOC440594 5
  • FLJ31662 5

External Ids for LINC01761 Gene

Summaries for LINC01761 Gene

GeneCards Summary for LINC01761 Gene

LINC01761 (Long Intergenic Non-Protein Coding RNA 1761) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01761 Gene

Genomics for LINC01761 Gene

Regulatory Elements for LINC01761 Gene

Enhancers for LINC01761 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F094921 1.1 ENCODE 16.2 -548.9 -548896 8.3 ARID4B SIN3A FEZF1 GLI4 ZNF48 ZNF2 ETS1 YY1 ZNF121 GLIS2 LINC01760 LINC01650 LINC01761 LOC107985092 ENSG00000233482 LOC729970 LOC101928098 RWDD3 CNN3 ENSG00000228852
GH01F095406 1.6 ENCODE 0.2 -67.2 -67150 2.9 NRF1 TEAD4 MNT ZNF316 POLR2A SMARCA4 POU5F1 CTBP2 MAFK ENSG00000237954 LINC01761
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LINC01761 on UCSC Golden Path with GeneCards custom track

Genomic Location for LINC01761 Gene

Chromosome:
1
Start:
95,474,737 bp from pter
End:
95,479,356 bp from pter
Size:
4,620 bases
Orientation:
Plus strand

Genomic View for LINC01761 Gene

Genes around LINC01761 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01761 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01761 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01761 Gene

Proteins for LINC01761 Gene

Post-translational modifications for LINC01761 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01761 Gene

Domains & Families for LINC01761 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01761 Gene

Function for LINC01761 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01761 Gene

Localization for LINC01761 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01761 Gene

Pathways & Interactions for LINC01761 Gene

SuperPathways for LINC01761 Gene

No Data Available

Interacting Proteins for LINC01761 Gene

Gene Ontology (GO) - Biological Process for LINC01761 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01761 Gene

Transcripts for LINC01761 Gene

mRNA/cDNA for LINC01761 Gene

(2) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LINC01761 Gene

Uncharacterized LOC440594:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01761 Gene

No ASD Table

Relevant External Links for LINC01761 Gene

GeneLoc Exon Structure for
LINC01761
ECgene alternative splicing isoforms for
LINC01761

Expression for LINC01761 Gene

SOURCE GeneReport for Unigene cluster for LINC01761 Gene:

Hs.514123
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for LINC01761 Gene

Orthologs for LINC01761 Gene

Evolution for LINC01761 Gene

ENSEMBL:
Gene Tree for LINC01761 (if available)
TreeFam:
Gene Tree for LINC01761 (if available)

No data available for Orthologs for LINC01761 Gene

Paralogs for LINC01761 Gene

No data available for Paralogs for LINC01761 Gene

Variants for LINC01761 Gene

Sequence variations from dbSNP and Humsavar for LINC01761 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs111563466 -- 95,473,213(+) CTGGT(A/C)TCAGC upstream-variant-2KB
rs113067581 -- 95,474,181(+) TCAGG(A/G)ATGTA upstream-variant-2KB
rs113677697 -- 95,473,412(+) GATGA(C/T)GGGCA upstream-variant-2KB
rs113682868 -- 95,474,598(+) TCCTG(-/A)AAAAA upstream-variant-2KB
rs113856431 -- 95,475,981(+) CTTGA(C/T)TAATC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for LINC01761 Gene

Variant ID Type Subtype PubMed ID
nsv1006113 CNV gain 25217958
nsv1006631 CNV gain 25217958

Relevant External Links for LINC01761 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01761

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC01761 Gene

Disorders for LINC01761 Gene

Relevant External Links for LINC01761

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LINC01761

No disorders were found for LINC01761 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01761 Gene

Publications for LINC01761 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for LINC01761 Gene

Sources for LINC01761 Gene

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