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Aliases for LINC01699 Gene

Subcategory (RNA class) for LINC01699 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LINC01699 Gene

  • Long Intergenic Non-Protein Coding RNA 1699 2 3 5
  • GM140 3

External Ids for LINC01699 Gene

Summaries for LINC01699 Gene

GeneCards Summary for LINC01699 Gene

LINC01699 (Long Intergenic Non-Protein Coding RNA 1699) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01699 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01699 Gene

Genomics for LINC01699 Gene

Regulatory Elements for LINC01699 Gene

Enhancers for LINC01699 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H181255 0.8 ENCODE 0.4 +19.3 19342 1 ZBTB21 JUN CEBPG ZNF316 RBAK FOS NFE2 MAFK NFE2L2 CHD2 LINC01699 CACNA1E
GH01H181251 0.7 ENCODE 0.4 +14.9 14862 0 PKNOX1 JUN CEBPB FEZF1 TSHZ1 EP300 JUND ZNF692 STAT3 RCOR1 LINC01699 CACNA1E
GH01H181217 0.2 ENCODE 0.4 -19.7 -19709 0 LINC01699 PIR52218
GH01H181216 0.2 ENCODE 0.4 -19.5 -19469 0 LINC01699 PIR52218
GH01H181398 0.7 ENCODE 0.1 +162.3 162341 0 NR2F1 JUNB DPF2 BATF SP1 POLR2A BCL11A EED IKZF1 ETV6 CACNA1E LINC01699
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LINC01699 on UCSC Golden Path with GeneCards custom track

Genomic Location for LINC01699 Gene

181,236,388 bp from pter
181,238,604 bp from pter
2,217 bases
Plus strand

Genomic View for LINC01699 Gene

Genes around LINC01699 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01699 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01699 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01699 Gene

Proteins for LINC01699 Gene

Post-translational modifications for LINC01699 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01699 Gene

Domains & Families for LINC01699 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01699 Gene

Function for LINC01699 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01699 Gene

Localization for LINC01699 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01699 Gene

Pathways & Interactions for LINC01699 Gene

SuperPathways for LINC01699 Gene

No Data Available

Interacting Proteins for LINC01699 Gene

Gene Ontology (GO) - Biological Process for LINC01699 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC01699 Gene

Drugs & Compounds for LINC01699 Gene

No Compound Related Data Available

Transcripts for LINC01699 Gene

mRNA/cDNA for LINC01699 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01699 Gene

No ASD Table

Relevant External Links for LINC01699 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC01699 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01699 Gene

Orthologs for LINC01699 Gene

Evolution for LINC01699 Gene

Gene Tree for LINC01699 (if available)
Gene Tree for LINC01699 (if available)

No data available for Orthologs for LINC01699 Gene

Paralogs for LINC01699 Gene

No data available for Paralogs for LINC01699 Gene

Variants for LINC01699 Gene

Sequence variations from dbSNP and Humsavar for LINC01699 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000406416 -- 181,237,090(+) GCCAA(C/G)GGCCC intron-variant
rs1000921575 -- 181,235,540(+) CTCAA(A/G)TAATA upstream-variant-2KB
rs1001807619 -- 181,235,505(+) TGCAC(A/G/T)CCAAC upstream-variant-2KB
rs1002802146 -- 181,236,897(+) CTTAC(C/T)ACCCA intron-variant
rs1004377135 -- 181,234,659(+) TTCCT(C/T)CAAAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for LINC01699 Gene

Variant ID Type Subtype PubMed ID
esv26294 CNV gain 19812545

Relevant External Links for LINC01699 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC01699 Gene

Disorders for LINC01699 Gene

Relevant External Links for LINC01699

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for LINC01699 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01699 Gene

Publications for LINC01699 Gene

  1. Identification of six novel genes by experimental validation of GeneMachine predicted genes. (PMID: 11891061) Makalowska I … Carpten JD (Gene 2002) 3 60

Products for LINC01699 Gene

Sources for LINC01699 Gene

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