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Aliases for LINC01621 Gene

Subcategory (RNA class) for LINC01621 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LINC01621 Gene

  • Long Intergenic Non-Protein Coding RNA 1621 2 3 5
  • Chromosome 6 Open Reading Frame 7 2
  • C6orf7 3

External Ids for LINC01621 Gene

Previous HGNC Symbols for LINC01621 Gene

  • C6orf7

Summaries for LINC01621 Gene

GeneCards Summary for LINC01621 Gene

LINC01621 (Long Intergenic Non-Protein Coding RNA 1621) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01621 Gene

Genomics for LINC01621 Gene

Regulatory Elements for LINC01621 Gene

Enhancers for LINC01621 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around LINC01621 on UCSC Golden Path with GeneCards custom track

Genomic Location for LINC01621 Gene

79,803,582 bp from pter
79,878,494 bp from pter
74,913 bases
Minus strand

Genomic View for LINC01621 Gene

Genes around LINC01621 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01621 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01621 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01621 Gene

Proteins for LINC01621 Gene

Post-translational modifications for LINC01621 Gene

No Post-translational modifications

Other Protein References for LINC01621 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LINC01621 Gene

Domains & Families for LINC01621 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01621 Gene

Function for LINC01621 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01621 Gene

Localization for LINC01621 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01621 Gene

Pathways & Interactions for LINC01621 Gene

SuperPathways for LINC01621 Gene

No Data Available

Interacting Proteins for LINC01621 Gene

Gene Ontology (GO) - Biological Process for LINC01621 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC01621 Gene

Drugs & Compounds for LINC01621 Gene

No Compound Related Data Available

Transcripts for LINC01621 Gene

mRNA/cDNA for LINC01621 Gene

(3) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01621 Gene

No ASD Table

Relevant External Links for LINC01621 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC01621 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for LINC01621 Gene

Orthologs for LINC01621 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for LINC01621 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia LOC101057754 35
  • 98.46 (n)
  • 97.22 (a)
Species with no ortholog for LINC01621:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for LINC01621 Gene

Gene Tree for LINC01621 (if available)
Gene Tree for LINC01621 (if available)

Paralogs for LINC01621 Gene

No data available for Paralogs for LINC01621 Gene

Variants for LINC01621 Gene

Sequence variations from dbSNP and Humsavar for LINC01621 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1010937 -- 79,855,105(+) AGTTT(A/C)CCAAG intron-variant
rs1010938 -- 79,855,228(+) GAGAT(C/T)TGGCC intron-variant
rs1079287 -- 79,860,132(+) TGATA(C/T)GTAAT intron-variant
rs1321838 -- 79,828,772(+) gtatg(A/T)ttgtc intron-variant
rs1321840 -- 79,846,469(+) CCTTC(C/T)CCTGT intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LINC01621 Gene

Disorders for LINC01621 Gene

Relevant External Links for LINC01621

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for LINC01621 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01621 Gene

Publications for LINC01621 Gene

  1. Genome-wide analysis of BMI in adolescents and young adults reveals additional insight into the effects of genetic loci over the life course. (PMID: 23669352) Graff M. … Berndt S.I. (Hum. Mol. Genet. 2013) 3 67
  2. Common genetic variation and susceptibility to partial epilepsies: a genome-wide association study. (PMID: 20522523) KasperaviciAte D. … Sisodiya S.M. (Brain 2010) 3

Products for LINC01621 Gene

Sources for LINC01621 Gene