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Aliases for LINC01614 Gene

Subcategory (RNA class) for LINC01614 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01614 Gene

  • Long Intergenic Non-Protein Coding RNA 1614 2 3 5
  • Lung Cancer Associated LncRNA 4 2 3
  • TCONS_00003105 3
  • LCAL4 3

External Ids for LINC01614 Gene

Summaries for LINC01614 Gene

GeneCards Summary for LINC01614 Gene

LINC01614 (Long Intergenic Non-Protein Coding RNA 1614) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01614 Gene

Genomics for LINC01614 Gene

Regulatory Elements for LINC01614 Gene

Enhancers for LINC01614 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G215716 1.1 Ensembl ENCODE dbSUPER 0.7 +0.0 46 2.2 ZNF579 JUND FOXA2 BHLHE40 FOXA3 CREB1 FOS NFE2L2 LINC01614 ENSG00000216721
GH02G215710 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.6 -5578 4.3 ELF3 PKNOX1 FOXA2 DMAP1 RAD21 RARA YY1 ZNF366 GATA2 FOS LINC01614 GC02M215662
GH02G215698 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -17.7 -17666 4.8 ELF3 FOXA2 SIN3A ARID4B RAD21 RARA GATA2 FOS TGIF2 NFIL3 ATIC LINC01614 GC02M215662
GH02G215747 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +32.1 32097 4.6 FOXA2 ATF1 MLX ZFP64 ARID4B DMAP1 ZNF48 YY1 SLC30A9 FOS ATIC FN1 LINC01614 ENSG00000216721
GH02G215727 1.4 Ensembl ENCODE dbSUPER 0.4 +10.9 10882 3.5 ELF3 FOXA2 DMAP1 RAD21 RARA YY1 GATA2 FOS CREM CEBPB LINC01614 ENSG00000216721
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LINC01614 on UCSC Golden Path with GeneCards custom track

Genomic Location for LINC01614 Gene

Chromosome:
2
Start:
215,717,969 bp from pter
End:
215,720,946 bp from pter
Size:
2,978 bases
Orientation:
Plus strand

Genomic View for LINC01614 Gene

Genes around LINC01614 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01614 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01614 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01614 Gene

Proteins for LINC01614 Gene

Post-translational modifications for LINC01614 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01614 Gene

Domains & Families for LINC01614 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01614 Gene

Function for LINC01614 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01614 Gene

Localization for LINC01614 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01614 Gene

Pathways & Interactions for LINC01614 Gene

SuperPathways for LINC01614 Gene

No Data Available

Interacting Proteins for LINC01614 Gene

Gene Ontology (GO) - Biological Process for LINC01614 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01614 Gene

Drugs & Compounds for LINC01614 Gene

No Compound Related Data Available

Transcripts for LINC01614 Gene

mRNA/cDNA for LINC01614 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01614 Gene

No ASD Table

Relevant External Links for LINC01614 Gene

GeneLoc Exon Structure for
LINC01614
ECgene alternative splicing isoforms for
LINC01614

Expression for LINC01614 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01614 Gene:

LINC01614
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01614 Gene

Orthologs for LINC01614 Gene

Evolution for LINC01614 Gene

ENSEMBL:
Gene Tree for LINC01614 (if available)
TreeFam:
Gene Tree for LINC01614 (if available)

No data available for Orthologs for LINC01614 Gene

Paralogs for LINC01614 Gene

No data available for Paralogs for LINC01614 Gene

Variants for LINC01614 Gene

Sequence variations from dbSNP and Humsavar for LINC01614 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000185882 -- 215,718,077(+) AAAAT(C/T)AGATA intron-variant, nc-transcript-variant
rs1000456541 -- 215,717,825(+) AATGA(C/T)GGCTG intron-variant, upstream-variant-2KB
rs1000488278 -- 215,717,850(+) TATAT(C/T)TTTTA intron-variant, upstream-variant-2KB
rs1000752165 -- 215,716,427(+) CCAGA(G/T)TGTCA intron-variant, upstream-variant-2KB
rs1001680779 -- 215,716,699(+) TGATG(C/G)AGGGA intron-variant, upstream-variant-2KB

Relevant External Links for LINC01614 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01614

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01614 Gene

Disorders for LINC01614 Gene

Relevant External Links for LINC01614

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LINC01614
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LINC01614

No disorders were found for LINC01614 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01614 Gene

Publications for LINC01614 Gene

  1. Transcriptome sequencing reveals altered long intergenic non-coding RNAs in lung cancer. (PMID: 25116943) White N.M. … Maher C.A. (Genome Biol. 2014) 2 3 64
  2. A novel lncRNA, LUADT1, promotes lung adenocarcinoma proliferation via the epigenetic suppression of p27. (PMID: 26291312) Qiu M. … Xu L. (Cell Death Dis 2015) 3 64

Products for LINC01614 Gene

Sources for LINC01614 Gene

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