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Aliases for LINC01563 Gene

Subcategory (RNA class) for LINC01563 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01563 Gene

  • Long Intergenic Non-Protein Coding RNA 1563 2 3
  • HP08942 3

External Ids for LINC01563 Gene

Summaries for LINC01563 Gene

GeneCards Summary for LINC01563 Gene

LINC01563 (Long Intergenic Non-Protein Coding RNA 1563) is a RNA Gene, and belongs to non-coding RNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01563 Gene

Genomics for LINC01563 Gene

Genomic Location for LINC01563 Gene

Start:
21,075,556 bp from pter
End:
21,090,683 bp from pter
Size:
15,128 bases
Orientation:
Plus strand

Genomic View for LINC01563 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC01563 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01563 Gene

No data available for Regulatory Elements for LINC01563 Gene

Proteins for LINC01563 Gene

Post-translational modifications for LINC01563 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01563 Gene

Domains for LINC01563 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for LINC01563 Gene

Function for LINC01563 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LINC01563 Gene

Localization for LINC01563 Gene

No data available for Gene Ontology (GO) - Cellular Components for LINC01563 Gene

Pathways for LINC01563 Gene

SuperPathways for LINC01563 Gene

No Data Available

Interacting Proteins for LINC01563 Gene

Gene Ontology (GO) - Biological Process for LINC01563 Gene

None

No data available for Pathways by source for LINC01563 Gene

Transcripts for LINC01563 Gene

mRNA/cDNA for LINC01563 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01563 Gene

No ASD Table

Relevant External Links for LINC01563 Gene

GeneLoc Exon Structure for
LINC01563
ECgene alternative splicing isoforms for
LINC01563

Expression for LINC01563 Gene

mRNA expression in normal human tissues for LINC01563 Gene

genes like me logo Genes that share expressions with LINC01563: view

Orthologs for LINC01563 Gene

Evolution for LINC01563 Gene

ENSEMBL:
Gene Tree for LINC01563 (if available)
TreeFam:
Gene Tree for LINC01563 (if available)

No data available for Orthologs for LINC01563 Gene

Paralogs for LINC01563 Gene

No data available for Paralogs for LINC01563 Gene

Variants for LINC01563 Gene

Sequence variations from dbSNP and Humsavar for LINC01563 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs872787 -- 21,075,839(+) aggaa(C/T)gggtg nc-transcript-variant
rs872788 -- 21,075,843(+) atggg(C/T)gtgca nc-transcript-variant
rs872789 -- 21,075,893(+) CTGCG(C/T)GGGGA nc-transcript-variant
rs899343 -- 21,076,481(-) ACTTA(A/G)TCCTC intron-variant
rs1011936 -- 21,089,860(-) taggc(A/G)attac intron-variant

Relevant External Links for LINC01563 Gene

HapMap Linkage Disequilibrium report
LINC01563

No data available for Structural Variations from Database of Genomic Variants (DGV) for LINC01563 Gene

Disorders for LINC01563 Gene

No disorders were found for LINC01563 Gene.

No data available for UniProtKB/Swiss-Prot for LINC01563 Gene

Publications for LINC01563 Gene

  1. Full-length transcriptome analysis of human retina-derived cell lines ARPE-19 and Y79 using the vector-capping method. (PMID: 21697133) Oshikawa M. … Kato S. (Invest. Ophthalmol. Vis. Sci. 2011) 3

Products for LINC01563 Gene

Sources for LINC01563 Gene

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