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Aliases for LINC01550 Gene

Subcategory (RNA class) for LINC01550 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01550 Gene

  • Long Intergenic Non-Protein Coding RNA 1550 2 3
  • Chromosome 14 Open Reading Frame 64 2
  • C14orf64 3

External Ids for LINC01550 Gene

Previous HGNC Symbols for LINC01550 Gene

  • C14orf64

Summaries for LINC01550 Gene

GeneCards Summary for LINC01550 Gene

LINC01550 (Long Intergenic Non-Protein Coding RNA 1550) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01550 Gene

Genomics for LINC01550 Gene

Genomic Location for LINC01550 Gene

Start:
97,925,610 bp from pter
End:
97,978,124 bp from pter
Size:
52,515 bases
Orientation:
Minus strand

Genomic View for LINC01550 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC01550 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01550 Gene

No data available for Regulatory Elements for LINC01550 Gene

Proteins for LINC01550 Gene

Post-translational modifications for LINC01550 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01550 Gene

Domains for LINC01550 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01550 Gene

Function for LINC01550 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LINC01550 Gene

Localization for LINC01550 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01550 Gene

Pathways for LINC01550 Gene

SuperPathways for LINC01550 Gene

No Data Available

Interacting Proteins for LINC01550 Gene

Gene Ontology (GO) - Biological Process for LINC01550 Gene

None

No data available for Pathways by source for LINC01550 Gene

Transcripts for LINC01550 Gene

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC01550
    • Block miRNA regulation of LINC01550 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for LINC01550

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for LINC01550 Gene

    No ASD Table

    Relevant External Links for LINC01550 Gene

    GeneLoc Exon Structure for
    LINC01550
    ECgene alternative splicing isoforms for
    LINC01550

    Expression for LINC01550 Gene

    mRNA expression in normal human tissues for LINC01550 Gene

    genes like me logo Genes that share expressions with LINC01550: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for LINC01550 Gene

    Orthologs for LINC01550 Gene

    Evolution for LINC01550 Gene

    ENSEMBL:
    Gene Tree for LINC01550 (if available)
    TreeFam:
    Gene Tree for LINC01550 (if available)

    No data available for Orthologs for LINC01550 Gene

    Paralogs for LINC01550 Gene

    No data available for Paralogs for LINC01550 Gene

    Variants for LINC01550 Gene

    Sequence variations from dbSNP and Humsavar for LINC01550 Gene

    SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
    rs718516 -- 97,931,692(+) TGTTA(C/T)GGAAG intron-variant
    rs754604 -- 97,958,439(+) ATAGG(A/G)TGACG intron-variant
    rs897714 -- 97,958,470(-) CCTCA(G/T)TCCCA intron-variant
    rs899116 -- 97,959,095(-) GGGGC(A/C)ATAGA intron-variant
    rs899117 -- 97,958,703(-) GTACA(A/G)GATAA intron-variant

    Relevant External Links for LINC01550 Gene

    HapMap Linkage Disequilibrium report
    LINC01550

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for LINC01550 Gene

    Disorders for LINC01550 Gene

    No disorders were found for LINC01550 Gene.

    No data available for UniProtKB/Swiss-Prot for LINC01550 Gene

    Publications for LINC01550 Gene

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
    3. Robust evidence for five new Graves' disease risk loci from a staged genome-wide association analysis. (PMID: 23612905) Zhao S.X. … Song H.D. (Hum. Mol. Genet. 2013) 3

    Products for LINC01550 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC01550
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for LINC01550
      • Block miRNA regulation of LINC01550 using miScript Target Protectors

      Sources for LINC01550 Gene

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