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Aliases for LINC01547 Gene

Subcategory (RNA class) for LINC01547 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LINC01547 Gene

  • Long Intergenic Non-Protein Coding RNA 1547 2 3 5
  • C21orf67 3 4
  • C21orf69 3 4
  • Chromosome 21 Open Reading Frame 69 2
  • Chromosome 21 Open Reading Frame 67 2
  • PRED54 3

External Ids for LINC01547 Gene

Previous HGNC Symbols for LINC01547 Gene

  • C21orf69
  • C21orf67

Summaries for LINC01547 Gene

GeneCards Summary for LINC01547 Gene

LINC01547 (Long Intergenic Non-Protein Coding RNA 1547) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01547 Gene

Genomics for LINC01547 Gene

Regulatory Elements for LINC01547 Gene

Enhancers for LINC01547 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around LINC01547 on UCSC Golden Path with GeneCards custom track

Promoters for LINC01547 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for LINC01547 Gene

44,932,814 bp from pter
44,939,913 bp from pter
7,100 bases
Minus strand

Genomic View for LINC01547 Gene

Genes around LINC01547 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01547 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01547 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01547 Gene

Proteins for LINC01547 Gene

  • Protein details for LINC01547 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Uncharacterized protein encoded by LINC01547
    Protein Accession:
    Secondary Accessions:
    • P58556
    • Q495D3
    • Q495D5

    Protein attributes for LINC01547 Gene

    204 amino acids
    Molecular mass:
    21308 Da
    Quaternary structure:
    No Data Available
    • Sequence=AAK60445.1; Type=Erroneous translation; Note=Wrong choice of CDS.; Evidence={ECO:0000305};

    Alternative splice isoforms for LINC01547 Gene


neXtProt entry for LINC01547 Gene

Post-translational modifications for LINC01547 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01547 Gene

Domains & Families for LINC01547 Gene

Protein Domains for LINC01547 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC01547: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01547 Gene

Function for LINC01547 Gene

genes like me logo Genes that share phenotypes with LINC01547: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01547 Gene

Localization for LINC01547 Gene

Gene Ontology (GO) - Cellular Components for LINC01547 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005783 endoplasmic reticulum IDA 16780588
genes like me logo Genes that share ontologies with LINC01547: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for LINC01547 Gene

Pathways & Interactions for LINC01547 Gene

SuperPathways for LINC01547 Gene

No Data Available

Interacting Proteins for LINC01547 Gene

Gene Ontology (GO) - Biological Process for LINC01547 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC01547 Gene

Drugs & Compounds for LINC01547 Gene

No Compound Related Data Available

Transcripts for LINC01547 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01547 Gene

ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b ^ 7
SP1: -
SP2: - - - -
SP3: -

Relevant External Links for LINC01547 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC01547 Gene

mRNA expression in normal human tissues for LINC01547 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01547 Gene:


mRNA Expression by UniProt/SwissProt for LINC01547 Gene:

Tissue specificity: Not detected in any tissue tested.
genes like me logo Genes that share expression patterns with LINC01547: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression and Protein tissue co-expression partners for LINC01547 Gene

Orthologs for LINC01547 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for LINC01547 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia C21orf67 35
  • 96 (a)
Species where no ortholog for LINC01547 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for LINC01547 Gene

Gene Tree for LINC01547 (if available)
Gene Tree for LINC01547 (if available)

Paralogs for LINC01547 Gene

No data available for Paralogs for LINC01547 Gene

Variants for LINC01547 Gene

Sequence variations from dbSNP and Humsavar for LINC01547 Gene

SNP ID Clin Chr 21 pos Sequence Context AA Info Type
rs7278847 -- 44,933,210(+) TTGGG(C/G)AGGTG downstream-variant-500B
rs7278544 -- 44,933,722(+) GGACA(C/T)GGGTC nc-transcript-variant
rs7278337 -- 44,934,835(+) CCCAG(A/G)GATGT intron-variant, nc-transcript-variant
rs75039181 -- 44,933,019(+) CCAGG(A/G)CTAGG downstream-variant-500B
rs113130690 -- 44,937,057(+) AGGAG(A/G)GTCCT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for LINC01547 Gene

Variant ID Type Subtype PubMed ID
esv3647138 CNV loss 21293372
nsv834110 CNV loss 17160897

Variation tolerance for LINC01547 Gene

Gene Damage Index Score: 1.48; 28.93% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for LINC01547 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for LINC01547 Gene

Disorders for LINC01547 Gene

Relevant External Links for LINC01547

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for LINC01547 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01547 Gene

Publications for LINC01547 Gene

  1. From PREDs and open reading frames to cDNA isolation: revisiting the human chromosome 21 transcription map. (PMID: 11707072) Reymond A. … Antonarakis S.E. (Genomics 2001) 2 3 4 22 65
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3 65
  3. A genome-wide RNAi screen identifies multiple synthetic lethal interactions with the Ras oncogene. (PMID: 19490893) Luo J. … Elledge S.J. (Cell 2009) 3 65
  4. Cell array-based intracellular localization screening reveals novel functional features of human chromosome 21 proteins. (PMID: 16780588) Hu Y.H. … Janitz M. (BMC Genomics 2006) 3 65
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 65

Products for LINC01547 Gene

Sources for LINC01547 Gene

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