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Aliases for LINC01465 Gene

Subcategory (RNA class) for LINC01465 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01465 Gene

  • Long Intergenic Non-Protein Coding RNA 1465 2 3
  • C12orf61 3 4
  • Putative Uncharacterized Protein C12orf61 3
  • Chromosome 12 Open Reading Frame 61 2

External Ids for LINC01465 Gene

Previous HGNC Symbols for LINC01465 Gene

  • C12orf61

Summaries for LINC01465 Gene

GeneCards Summary for LINC01465 Gene

LINC01465 (Long Intergenic Non-Protein Coding RNA 1465) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01465 Gene

Genomics for LINC01465 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for LINC01465 Gene

Start:
62,601,751 bp from pter
End:
62,603,690 bp from pter
Size:
1,940 bases
Orientation:
Minus strand

Genomic View for LINC01465 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC01465 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01465 Gene

No data available for Regulatory Elements for LINC01465 Gene

Proteins for LINC01465 Gene

  • Protein details for LINC01465 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N7H1-CL061_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by LINC01465
    Protein Accession:
    Q8N7H1
    Secondary Accessions:
    • B2RMN9
    • Q3ZCV4

    Protein attributes for LINC01465 Gene

    Size:
    131 amino acids
    Molecular mass:
    13435 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LINC01465 Gene

Proteomics data for LINC01465 Gene at MOPED

Post-translational modifications for LINC01465 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01465 Gene

Domains for LINC01465 Gene

Protein Domains for LINC01465 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC01465: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01465 Gene

Function for LINC01465 Gene

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC01465
    • Block miRNA regulation of LINC01465 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for LINC01465

    In Situ Assay Products

    Flow Cytometry Products

    No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01465 Gene

    Localization for LINC01465 Gene

    No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01465 Gene

    Pathways for LINC01465 Gene

    SuperPathways for LINC01465 Gene

    No Data Available

    Interacting Proteins for LINC01465 Gene

    Gene Ontology (GO) - Biological Process for LINC01465 Gene

    None

    No data available for Pathways by source for LINC01465 Gene

    Transcripts for LINC01465 Gene

    mRNA/cDNA for LINC01465 Gene

    (1) REFSEQ mRNAs :
    (7) Selected AceView cDNA sequences:
    (3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

    Alternative Splicing Database (ASD) splice patterns (SP) for LINC01465 Gene

    No ASD Table

    Relevant External Links for LINC01465 Gene

    GeneLoc Exon Structure for
    LINC01465
    ECgene alternative splicing isoforms for
    LINC01465

    Expression for LINC01465 Gene

    mRNA expression in normal human tissues for LINC01465 Gene

    Protein differential expression in normal tissues for LINC01465 Gene

    This gene is overexpressed in Heart (69.0).

    Integrated Proteomics: protein expression from ProteomicsDB and MOPED for LINC01465 Gene

    genes like me logo Genes that share expressions with LINC01465: view

    Expression partners for LINC01465 Gene

    * - Elite partner

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for LINC01465 Gene

    Orthologs for LINC01465 Gene

    Evolution for LINC01465 Gene

    ENSEMBL:
    Gene Tree for LINC01465 (if available)
    TreeFam:
    Gene Tree for LINC01465 (if available)

    No data available for Orthologs for LINC01465 Gene

    Paralogs for LINC01465 Gene

    No data available for Paralogs for LINC01465 Gene

    Variants for LINC01465 Gene

    Sequence variations from dbSNP and Humsavar for LINC01465 Gene

    SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
    rs1157629 -- 62,601,502(-) AATCA(A/C)ACCAT downstream-variant-500B, intron-variant
    rs4763179 -- 62,601,489(+) GATAG(A/G)TGAGT downstream-variant-500B, intron-variant
    rs4763180 -- 62,601,560(+) GCTTT(A/G)TCAGG downstream-variant-500B, intron-variant
    rs7306378 -- 62,604,747(+) TTTTT(A/T)TTTTA upstream-variant-2KB
    rs10877888 -- 62,605,374(+) AAATT(C/G)TGCTG upstream-variant-2KB

    Relevant External Links for LINC01465 Gene

    HapMap Linkage Disequilibrium report
    LINC01465

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for LINC01465 Gene

    Disorders for LINC01465 Gene

    No disorders were found for LINC01465 Gene.

    No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for LINC01465 Gene

    Publications for LINC01465 Gene

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
    4. The finished DNA sequence of human chromosome 12. (PMID: 16541075) Scherer S.E. … Gibbs R.A. (Nature 2006) 4

    Products for LINC01465 Gene

    • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
    • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC01465
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for LINC01465
      • Block miRNA regulation of LINC01465 using miScript Target Protectors

      Sources for LINC01465 Gene

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