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Aliases for LINC01465 Gene

Subcategory (RNA class) for LINC01465 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01465 Gene

  • Long Intergenic Non-Protein Coding RNA 1465 2 3
  • C12orf61 3 4
  • Putative Uncharacterized Protein C12orf61 3
  • Chromosome 12 Open Reading Frame 61 2

External Ids for LINC01465 Gene

Previous HGNC Symbols for LINC01465 Gene

  • C12orf61

Summaries for LINC01465 Gene

GeneCards Summary for LINC01465 Gene

LINC01465 (Long Intergenic Non-Protein Coding RNA 1465) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01465 Gene

Genomics for LINC01465 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for LINC01465 Gene

Chromosome:
12
Start:
62,601,751 bp from pter
End:
62,603,690 bp from pter
Size:
1,940 bases
Orientation:
Minus strand

Genomic View for LINC01465 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC01465 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01465 Gene

No data available for Regulatory Elements for LINC01465 Gene

Proteins for LINC01465 Gene

  • Protein details for LINC01465 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N7H1-CL061_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by LINC01465
    Protein Accession:
    Q8N7H1
    Secondary Accessions:
    • B2RMN9
    • Q3ZCV4

    Protein attributes for LINC01465 Gene

    Size:
    131 amino acids
    Molecular mass:
    13435 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LINC01465 Gene

Proteomics data for LINC01465 Gene at MOPED

Post-translational modifications for LINC01465 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01465 Gene

Domains & Families for LINC01465 Gene

Protein Domains for LINC01465 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC01465: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01465 Gene

Function for LINC01465 Gene

Phenotypes for LINC01465 Gene

GenomeRNAi human phenotypes for LINC01465:
genes like me logo Genes that share phenotypes with LINC01465: view

Animal Model Products

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC01465
    • Block miRNA regulation of LINC01465 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for LINC01465

    In Situ Assay Products

    Flow Cytometry Products

    No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01465 Gene

    Localization for LINC01465 Gene

    No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01465 Gene

    Pathways & Interactions for LINC01465 Gene

    SuperPathways for LINC01465 Gene

    No Data Available

    Interacting Proteins for LINC01465 Gene

    Gene Ontology (GO) - Biological Process for LINC01465 Gene

    None

    No data available for Pathways by source and SIGNOR curated interactions for LINC01465 Gene

    Drugs & Compounds for LINC01465 Gene

    No Compound Related Data Available

    Transcripts for LINC01465 Gene

    mRNA/cDNA for LINC01465 Gene

    (1) REFSEQ mRNAs :
    (7) Selected AceView cDNA sequences:
    (3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

    miRNA Products

    • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC01465
      • Block miRNA regulation of LINC01465 using miScript Target Protectors

      Inhibitory RNA Products

      • Predesigned siRNA for gene silencing in human,mouse,rat for LINC01465

      Flow Cytometry Products

      Alternative Splicing Database (ASD) splice patterns (SP) for LINC01465 Gene

      No ASD Table

      Relevant External Links for LINC01465 Gene

      GeneLoc Exon Structure for
      LINC01465
      ECgene alternative splicing isoforms for
      LINC01465

      Expression for LINC01465 Gene

      mRNA expression in normal human tissues for LINC01465 Gene

      Protein differential expression in normal tissues from HIPED for LINC01465 Gene

      This gene is overexpressed in Heart (69.0).

      Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for LINC01465 Gene



      genes like me logo Genes that share expression patterns with LINC01465: view

      Protein tissue co-expression partners for LINC01465 Gene

      - Elite partner

      Primer Products

      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat

      In Situ Assay Products

      No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for LINC01465 Gene

      Orthologs for LINC01465 Gene

      Evolution for LINC01465 Gene

      ENSEMBL:
      Gene Tree for LINC01465 (if available)
      TreeFam:
      Gene Tree for LINC01465 (if available)

      No data available for Orthologs for LINC01465 Gene

      Paralogs for LINC01465 Gene

      No data available for Paralogs for LINC01465 Gene

      Variants for LINC01465 Gene

      Sequence variations from dbSNP and Humsavar for LINC01465 Gene

      SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
      rs1157629 -- 62,601,502(-) AATCA(A/C)ACCAT downstream-variant-500B
      rs4763179 -- 62,601,489(+) GATAG(A/G)TGAGT downstream-variant-500B
      rs4763180 -- 62,601,560(+) GCTTT(A/G)TCAGG downstream-variant-500B
      rs7306378 -- 62,604,747(+) TTTTT(A/T)TTTTA upstream-variant-2KB
      rs10877888 -- 62,605,374(+) AAATT(C/G)TGCTG upstream-variant-2KB

      Variation tolerance for LINC01465 Gene

      Gene Damage Index Score: 1.00; 20.49% of all genes are more intolerant (likely to be disease-causing)

      Relevant External Links for LINC01465 Gene

      HapMap Linkage Disequilibrium report
      LINC01465

      No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for LINC01465 Gene

      Disorders for LINC01465 Gene

      Relevant External Links for LINC01465

      Atlas of Genetics and Cytogenetics in Oncology and Haematology:
      LINC01465
      genes like me logo Genes that share disorders with LINC01465: view

      No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01465 Gene

      Publications for LINC01465 Gene

      1. The finished DNA sequence of human chromosome 12. (PMID: 16541075) Scherer S.E. … Gibbs R.A. (Nature 2006) 67
      2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 67
      3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67
      4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 67

      Products for LINC01465 Gene

      • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
      • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC01465
        • QuantiTect SYBR Green Assays in human,mouse,rat
        • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
        • QuantiFast Probe-based Assays in human,mouse,rat
        • Predesigned siRNA for gene silencing in human,mouse,rat for LINC01465
        • Block miRNA regulation of LINC01465 using miScript Target Protectors

        Sources for LINC01465 Gene

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