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Aliases for LINC01451 Gene

Subcategory (RNA class) for LINC01451 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01451 Gene

  • Long Intergenic Non-Protein Coding RNA 1451 2 3
  • Hepatocellular Carcinoma Associated Transcript 4 (Non-Protein Coding) 2 3
  • FP7915 Protein 3
  • HCCAT4 3

External Ids for LINC01451 Gene

Previous HGNC Symbols for LINC01451 Gene

  • HCCAT4

Summaries for LINC01451 Gene

GeneCards Summary for LINC01451 Gene

LINC01451 (Long Intergenic Non-Protein Coding RNA 1451) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01451 Gene

Genomics for LINC01451 Gene

Genomic Location for LINC01451 Gene

Chromosome:
9
Start:
136,612,024 bp from pter
End:
136,617,181 bp from pter
Size:
5,158 bases
Orientation:
Minus strand

Genomic View for LINC01451 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC01451 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01451 Gene

No data available for Regulatory Elements for LINC01451 Gene

Proteins for LINC01451 Gene

Post-translational modifications for LINC01451 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01451 Gene

Domains & Families for LINC01451 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01451 Gene

Function for LINC01451 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01451 Gene

Localization for LINC01451 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01451 Gene

Pathways & Interactions for LINC01451 Gene

SuperPathways for LINC01451 Gene

No Data Available

Interacting Proteins for LINC01451 Gene

Gene Ontology (GO) - Biological Process for LINC01451 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01451 Gene

Drugs & Compounds for LINC01451 Gene

No Compound Related Data Available

Transcripts for LINC01451 Gene

mRNA/cDNA for LINC01451 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01451 Gene

No ASD Table

Relevant External Links for LINC01451 Gene

GeneLoc Exon Structure for
LINC01451
ECgene alternative splicing isoforms for
LINC01451

Expression for LINC01451 Gene

No Expression Related Data Available

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for LINC01451 Gene

Orthologs for LINC01451 Gene

Evolution for LINC01451 Gene

ENSEMBL:
Gene Tree for LINC01451 (if available)
TreeFam:
Gene Tree for LINC01451 (if available)

No data available for Orthologs for LINC01451 Gene

Paralogs for LINC01451 Gene

No data available for Paralogs for LINC01451 Gene

Variants for LINC01451 Gene

Sequence variations from dbSNP and Humsavar for LINC01451 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
rs914744 -- 136,616,341(-) GCAAC(C/T)GGAGC nc-transcript-variant
rs914745 -- 136,615,699(-) GAGGC(A/G)CCTGC nc-transcript-variant
rs2385894 -- 136,615,878(-) AAGCC(C/T)TGTCC nc-transcript-variant
rs6560640 -- 136,613,380(+) caggc(A/G)gatca intron-variant
rs7031889 -- 136,617,449(+) GCCCC(A/G)GGTCT upstream-variant-2KB

Relevant External Links for LINC01451 Gene

HapMap Linkage Disequilibrium report
LINC01451

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01451 Gene

Disorders for LINC01451 Gene

Relevant External Links for LINC01451

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LINC01451
genes like me logo Genes that share disorders with LINC01451: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01451 Gene

Publications for LINC01451 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 67

Products for LINC01451 Gene

Sources for LINC01451 Gene

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