Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LINC01355 Gene

Subcategory (RNA class) for LINC01355 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01355 Gene

  • Long Intergenic Non-Protein Coding RNA 1355 2 3 5

External Ids for LINC01355 Gene

Summaries for LINC01355 Gene

GeneCards Summary for LINC01355 Gene

LINC01355 (Long Intergenic Non-Protein Coding RNA 1355) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01355 Gene

Genomics for LINC01355 Gene

Regulatory Elements for LINC01355 Gene

Enhancers for LINC01355 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F024266 1 ENCODE 70 -980.2 -980237 1.6 ZFP64 YBX1 ZNF302 ZNF416 KLF7 FOS TSHZ1 REST ZNF623 ZNF518A LINC01355 ZNF436-AS1 ELOA RPL11 SYF2 ELOA-AS1 LOC105376871 GRHL3 PNRC2 GC01M024322
GH01F023691 1.2 ENCODE 50.5 -405.9 -405871 3.1 ARNT CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 LINC01355 PNRC2 RPL11 ELOA GC01M023708
GH01F022653 0.9 Ensembl 59.5 +633.0 632952 1.2 ZNF493 ZFP64 ZNF121 ZNF302 ZNF354C ZNF680 ZNF654 ZBTB11 OVOL3 CEBPB LINC01355 CDC42-IT1 ZBTB40-IT1 ZNF436-AS1 ENSG00000225952 ENSG00000271428 C1QB GC01P022661 GC01P022662
GH01F023975 2.2 ENCODE 16.2 -692.1 -692085 6.4 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ARID4B SIN3A DMAP1 ZNF2 RPL11 ELOA LINC01355 CNR2 PNRC2 SRSF10
GH01F023451 1.4 Ensembl ENCODE 24.4 -165.6 -165601 2.3 HDGF PKNOX1 ARNT CREB3L1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF766 ASAP3 LINC01355 RPL11 PNRC2 GC01P023453 GC01M023439
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LINC01355 on UCSC Golden Path with GeneCards custom track

Genomic Location for LINC01355 Gene

Chromosome:
1
Start:
23,281,309 bp from pter
End:
23,286,752 bp from pter
Size:
5,444 bases
Orientation:
Minus strand

Genomic View for LINC01355 Gene

Genes around LINC01355 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01355 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01355 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01355 Gene

Proteins for LINC01355 Gene

Post-translational modifications for LINC01355 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01355 Gene

Domains & Families for LINC01355 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01355 Gene

Function for LINC01355 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01355 Gene

Localization for LINC01355 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01355 Gene

Pathways & Interactions for LINC01355 Gene

SuperPathways for LINC01355 Gene

No Data Available

Interacting Proteins for LINC01355 Gene

Gene Ontology (GO) - Biological Process for LINC01355 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01355 Gene

Transcripts for LINC01355 Gene

mRNA/cDNA for LINC01355 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01355 Gene

No ASD Table

Relevant External Links for LINC01355 Gene

GeneLoc Exon Structure for
LINC01355
ECgene alternative splicing isoforms for
LINC01355

Expression for LINC01355 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LINC01355 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01355 Gene:

LINC01355
genes like me logo Genes that share expression patterns with LINC01355: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for LINC01355 Gene

Orthologs for LINC01355 Gene

Evolution for LINC01355 Gene

ENSEMBL:
Gene Tree for LINC01355 (if available)
TreeFam:
Gene Tree for LINC01355 (if available)

No data available for Orthologs for LINC01355 Gene

Paralogs for LINC01355 Gene

No data available for Paralogs for LINC01355 Gene

Variants for LINC01355 Gene

Sequence variations from dbSNP and Humsavar for LINC01355 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs10917369 -- 23,285,651(+) GAACA(C/T)TGGAC upstream-variant-2KB
rs111392073 -- 23,282,841(+) ACAAC(A/G)GGTTT nc-transcript-variant
rs113282811 -- 23,282,386(+) TGGCA(C/T)GACAT nc-transcript-variant
rs114542072 -- 23,286,570(+) GCTGT(C/T)AGTCA upstream-variant-2KB
rs116155838 -- 23,285,245(+) AATAC(A/T)GTTTG nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for LINC01355 Gene

Variant ID Type Subtype PubMed ID
nsv509047 CNV insertion 20534489
nsv6631 CNV insertion 18451855

Relevant External Links for LINC01355 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01355

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC01355 Gene

Disorders for LINC01355 Gene

Relevant External Links for LINC01355

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LINC01355

No disorders were found for LINC01355 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01355 Gene

Publications for LINC01355 Gene

No publications were found for LINC01355 Gene.

Products for LINC01355 Gene

Sources for LINC01355 Gene

Content
Loading form....