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Aliases for LINC01355 Gene

Subcategory (RNA class) for LINC01355 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01355 Gene

  • Long Intergenic Non-Protein Coding RNA 1355 2 3 5

External Ids for LINC01355 Gene

Summaries for LINC01355 Gene

GeneCards Summary for LINC01355 Gene

LINC01355 (Long Intergenic Non-Protein Coding RNA 1355) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01355 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01355 Gene

Genomics for LINC01355 Gene

Regulatory Elements for LINC01355 Gene

Enhancers for LINC01355 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H023521 1.9 FANTOM5 Ensembl ENCODE dbSUPER 34.2 -241.9 -241932 13 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 CBX5 LINC01355 SRSF10 KDM1A HNRNPR ASAP3 ID3 ZNF436 TCEA3 PNRC2 ENSG00000271420
GH01H023691 1.1 ENCODE 50.5 -405.9 -405871 3 HDGF FOXA2 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 SRSF10 SRRM1 LINC01355 HNRNPR PNRC2 KDM1A RPL11 ELOA ASAP3 GC01M023708
GH01H023539 1.6 Ensembl ENCODE dbSUPER 29.3 -253.2 -253238 1 HDGF PKNOX1 ARNT ARID4B SLC30A9 ZNF766 ZNF143 ZNF207 ZC3H11A REST LINC01355 SRSF10 HNRNPR ZNF436-AS1 KDM1A ELOA E2F2 LOC105376859
GH01H023589 1.9 FANTOM5 Ensembl ENCODE dbSUPER 21.1 -309.6 -309564 14 HDGF PKNOX1 FOXA2 MLX ARID4B ZNF766 ZNF143 FOS JUNB REST SRSF10 LINC01355 E2F2 ELOA HNRNPR PNRC2 ID3 ZNF436 RPL11 ASAP3
GH01H023625 0.9 dbSUPER 42.7 -338.9 -338900 0 YBX3 HDGF PKNOX1 ATF1 TBL1XR1 ZNF473 ZNF195 NFXL1 YBX1 GLI4 ZNF436-AS1 HNRNPR SRSF10 LINC01355 KDM1A PNRC2 RPL11 MDS2 ID3 E2F2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LINC01355 on UCSC Golden Path with GeneCards custom track

Genomic Location for LINC01355 Gene

Chromosome:
1
Start:
23,281,309 bp from pter
End:
23,286,752 bp from pter
Size:
5,444 bases
Orientation:
Minus strand

Genomic View for LINC01355 Gene

Genes around LINC01355 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01355 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01355 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01355 Gene

Proteins for LINC01355 Gene

Post-translational modifications for LINC01355 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01355 Gene

Domains & Families for LINC01355 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01355 Gene

Function for LINC01355 Gene

Phenotypes From GWAS Catalog for LINC01355 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01355 Gene

Localization for LINC01355 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01355 Gene

Pathways & Interactions for LINC01355 Gene

SuperPathways for LINC01355 Gene

No Data Available

Interacting Proteins for LINC01355 Gene

Gene Ontology (GO) - Biological Process for LINC01355 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01355 Gene

Drugs & Compounds for LINC01355 Gene

No Compound Related Data Available

Transcripts for LINC01355 Gene

mRNA/cDNA for LINC01355 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01355 Gene

No ASD Table

Relevant External Links for LINC01355 Gene

GeneLoc Exon Structure for
LINC01355
ECgene alternative splicing isoforms for
LINC01355

Expression for LINC01355 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01355 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01355 Gene:

LINC01355
genes like me logo Genes that share expression patterns with LINC01355: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01355 Gene

Orthologs for LINC01355 Gene

Evolution for LINC01355 Gene

ENSEMBL:
Gene Tree for LINC01355 (if available)
TreeFam:
Gene Tree for LINC01355 (if available)

No data available for Orthologs for LINC01355 Gene

Paralogs for LINC01355 Gene

No data available for Paralogs for LINC01355 Gene

Variants for LINC01355 Gene

Sequence variations from dbSNP and Humsavar for LINC01355 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000117546 -- 23,285,702(+) TATCA(C/T)TCATT upstream-variant-2KB
rs1000635067 -- 23,281,522(+) TCTCA(C/T)GATTT nc-transcript-variant
rs1001067823 -- 23,284,407(+) TTGCC(A/C)AGGCT nc-transcript-variant
rs1001328795 -- 23,284,864(+) ATTAA(C/G)TAAGA intron-variant
rs1002990824 -- 23,285,150(+) CAAAT(-/A)AAAAA nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for LINC01355 Gene

Variant ID Type Subtype PubMed ID
nsv509047 CNV insertion 20534489
nsv6631 CNV insertion 18451855

Relevant External Links for LINC01355 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01355

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC01355 Gene

Disorders for LINC01355 Gene

Relevant External Links for LINC01355

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LINC01355

No disorders were found for LINC01355 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01355 Gene

Publications for LINC01355 Gene

No publications were found for LINC01355 Gene.

Products for LINC01355 Gene

Sources for LINC01355 Gene

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