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Aliases for LINC01310 Gene

Subcategory (RNA class) for LINC01310 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LINC01310 Gene

  • Long Intergenic Non-Protein Coding RNA 1310 2 3 5
  • WI2-81516E3.1 3

External Ids for LINC01310 Gene

Summaries for LINC01310 Gene

GeneCards Summary for LINC01310 Gene

LINC01310 (Long Intergenic Non-Protein Coding RNA 1310) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01310 Gene

Genomics for LINC01310 Gene

Regulatory Elements for LINC01310 Gene

Enhancers for LINC01310 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22G048867 0.4 ENCODE 5.3 +0.8 804 0.9 ZFP3 LINC01310 GC22P048902 GC22P048910 GC22P048909 GC22P048907 GC22P048906 GC22P048905 GC22P048904 GC22P048903 PIR46255
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LINC01310 on UCSC Golden Path with GeneCards custom track

Genomic Location for LINC01310 Gene

48,866,770 bp from pter
48,898,386 bp from pter
31,617 bases
Plus strand

Genomic View for LINC01310 Gene

Genes around LINC01310 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01310 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01310 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01310 Gene

Proteins for LINC01310 Gene

Post-translational modifications for LINC01310 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01310 Gene

Domains & Families for LINC01310 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01310 Gene

Function for LINC01310 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01310 Gene

Localization for LINC01310 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01310 Gene

Pathways & Interactions for LINC01310 Gene

SuperPathways for LINC01310 Gene

No Data Available

Interacting Proteins for LINC01310 Gene

Gene Ontology (GO) - Biological Process for LINC01310 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC01310 Gene

Drugs & Compounds for LINC01310 Gene

No Compound Related Data Available

Transcripts for LINC01310 Gene

mRNA/cDNA for LINC01310 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01310 Gene

No ASD Table

Relevant External Links for LINC01310 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC01310 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01310 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01310 Gene:

genes like me logo Genes that share expression patterns with LINC01310: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01310 Gene

Orthologs for LINC01310 Gene

Evolution for LINC01310 Gene

Gene Tree for LINC01310 (if available)
Gene Tree for LINC01310 (if available)

No data available for Orthologs for LINC01310 Gene

Paralogs for LINC01310 Gene

No data available for Paralogs for LINC01310 Gene

Variants for LINC01310 Gene

Sequence variations from dbSNP and Humsavar for LINC01310 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type
rs1000219097 -- 48,874,778(+) ATCTC(A/G)TTTCT intron-variant
rs1000220702 -- 48,872,670(+) TCCTT(-/C)CCTTC intron-variant
rs1000275628 -- 48,881,228(+) TCTAT(G/T)TTTTT intron-variant
rs1000295824 -- 48,885,185(+) TCTGG(A/G)GAAAC intron-variant
rs1000318558 -- 48,870,866(+) ATGTG(C/T)GCCCA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for LINC01310 Gene

Variant ID Type Subtype PubMed ID
dgv2630e59 CNV duplication 20981092
esv3575496 CNV gain 25503493
nsv1055181 CNV gain 25217958
nsv1062235 CNV gain 25217958
nsv1123610 CNV deletion 24896259
nsv471219 CNV gain 18288195

Relevant External Links for LINC01310 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC01310 Gene

Disorders for LINC01310 Gene

Relevant External Links for LINC01310

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for LINC01310 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01310 Gene

Publications for LINC01310 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for LINC01310 Gene

Sources for LINC01310 Gene

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