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Aliases for LINC01280 Gene

Subcategory (RNA class) for LINC01280 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LINC01280 Gene

  • Long Intergenic Non-Protein Coding RNA 1280 2 3 5

External Ids for LINC01280 Gene

Summaries for LINC01280 Gene

GeneCards Summary for LINC01280 Gene

LINC01280 (Long Intergenic Non-Protein Coding RNA 1280) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01280 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01280 Gene

Genomics for LINC01280 Gene

Regulatory Elements for LINC01280 Gene

Enhancers for LINC01280 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H216649 1.4 Ensembl ENCODE dbSUPER 12 -45.5 -45517 6.2 ELF3 RAD21 THRB RARA ZSCAN5C SCRT2 FOS ATF7 NR2F2 NFIL3 LINC01280 ENSG00000225794 ENSG00000236886 IGFBP5 IGFBP2
GH02H216565 0.6 dbSUPER 12.3 +41.0 40971 1.1 SOX13 FOXA2 FOXA3 ETV4 ARID4B BCL6 TEAD3 IGFBP2 ENSG00000225794 LINC01280 LOC105373871 LOC101928180
GH02H216562 0.2 dbSUPER 11.9 +43.9 43938 1.3 IGFBP2 ENSG00000225794 LINC01280 LOC105373871 LOC101928180
GH02H216606 1.3 Ensembl ENCODE dbSUPER 0.7 +0.1 55 1.1 HDGF PKNOX1 ATF1 MAX ETS1 POLR2A EGR1 IKZF2 CREM MAZ LINC01280 ENSG00000225794
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LINC01280 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01280 Gene

Genomic Locations for LINC01280 Gene
16,946 bases
Minus strand

Genomic View for LINC01280 Gene

Genes around LINC01280 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01280 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01280 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01280 Gene

Proteins for LINC01280 Gene

Post-translational modifications for LINC01280 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01280 Gene

Domains & Families for LINC01280 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01280 Gene

Function for LINC01280 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01280 Gene

Localization for LINC01280 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01280 Gene

Pathways & Interactions for LINC01280 Gene

SuperPathways for LINC01280 Gene

No Data Available

Interacting Proteins for LINC01280 Gene

Gene Ontology (GO) - Biological Process for LINC01280 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC01280 Gene

Drugs & Compounds for LINC01280 Gene

No Compound Related Data Available

Transcripts for LINC01280 Gene

mRNA/cDNA for LINC01280 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01280 Gene

No ASD Table

Relevant External Links for LINC01280 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC01280 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01280 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01280 Gene:

genes like me logo Genes that share expression patterns with LINC01280: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01280 Gene

Orthologs for LINC01280 Gene

Evolution for LINC01280 Gene

Gene Tree for LINC01280 (if available)
Gene Tree for LINC01280 (if available)

No data available for Orthologs for LINC01280 Gene

Paralogs for LINC01280 Gene

No data available for Paralogs for LINC01280 Gene

Variants for LINC01280 Gene

Sequence variations from dbSNP and Humsavar for LINC01280 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000139176 -- 216,599,726(+) GATCT(G/T)CCCGC intron-variant
rs1000145266 -- 216,600,166(+) ATGAA(A/C/T)CTTGG intron-variant
rs1000190281 -- 216,599,554(+) ATCTC(A/G)GCTCA intron-variant
rs1000249668 -- 216,593,258(+) TTGCT(A/G)AGGAC intron-variant
rs1000466535 -- 216,598,395(+) CATTT(-/CAAACAAA)CAAAC intron-variant

Relevant External Links for LINC01280 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01280 Gene

Disorders for LINC01280 Gene

Relevant External Links for LINC01280

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for LINC01280 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01280 Gene

Publications for LINC01280 Gene

No publications were found for LINC01280 Gene.

Products for LINC01280 Gene

Sources for LINC01280 Gene

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