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Aliases for LINC01194 Gene

Subcategory (RNA class) for LINC01194 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01194 Gene

  • Long Intergenic Non-Protein Coding RNA 1194 2 3
  • Cancer/Testis Antigen 49 (Non-Protein Coding) 3
  • Cancer/Testis Antigen 49 2
  • Tumor Antigen Gene 2
  • Tumor Antigen 3
  • CT49 3
  • TAG 3

External Ids for LINC01194 Gene

Previous HGNC Symbols for LINC01194 Gene

  • CT49

Summaries for LINC01194 Gene

GeneCards Summary for LINC01194 Gene

LINC01194 (Long Intergenic Non-Protein Coding RNA 1194) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with LINC01194 include pineocytoma and mesothelioma.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01194 Gene

Genomics for LINC01194 Gene

Genomic Location for LINC01194 Gene

Chromosome:
5
Start:
12,574,857 bp from pter
End:
12,805,183 bp from pter
Size:
230,327 bases
Orientation:
Plus strand

Genomic View for LINC01194 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for LINC01194 Gene

No data available for Regulatory Elements for LINC01194 Gene

Proteins for LINC01194 Gene

Post-translational modifications for LINC01194 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01194 Gene

Domains & Families for LINC01194 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01194 Gene

Function for LINC01194 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01194 Gene

Localization for LINC01194 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01194 Gene

Pathways & Interactions for LINC01194 Gene

SuperPathways for LINC01194 Gene

No Data Available

Interacting Proteins for LINC01194 Gene

Gene Ontology (GO) - Biological Process for LINC01194 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01194 Gene

Drugs & Compounds for LINC01194 Gene

(11) Drugs for LINC01194 Gene - From: NovoSeek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Estradiol Approved, Investigational Pharma Sex hormone 1057
Progesterone Approved Pharma Inhibition, Pore Blocker Endogenous progesterone receptor agonist 473
Testosterone Approved, Investigational Pharma Endogenous androgen receptor agonist 453
Zinc Approved Pharma 1404
Forskolin Experimental Pharma 0

(12) Additional Compounds for LINC01194 Gene - From: NovoSeek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
2,5-Oligoadenylate
5-Aza-2deoxycytidine
Agar
deoxyribonucleic acid
GnRH
genes like me logo Genes that share compounds with LINC01194: view

Transcripts for LINC01194 Gene

mRNA/cDNA for LINC01194 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01194 Gene

No ASD Table

Relevant External Links for LINC01194 Gene

GeneLoc Exon Structure for
LINC01194
ECgene alternative splicing isoforms for
LINC01194

Expression for LINC01194 Gene

mRNA expression in normal human tissues for LINC01194 Gene

mRNA differential expression in normal tissues according to GTEx for LINC01194 Gene

This gene is overexpressed in Testis (x53.0).
genes like me logo Genes that share expression patterns with LINC01194: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for LINC01194 Gene

Orthologs for LINC01194 Gene

Evolution for LINC01194 Gene

ENSEMBL:
Gene Tree for LINC01194 (if available)
TreeFam:
Gene Tree for LINC01194 (if available)

No data available for Orthologs for LINC01194 Gene

Paralogs for LINC01194 Gene

No data available for Paralogs for LINC01194 Gene

Variants for LINC01194 Gene

Relevant External Links for LINC01194 Gene

HapMap Linkage Disequilibrium report
LINC01194

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01194 Gene

Disorders for LINC01194 Gene

MalaCards: The human disease database

(4) MalaCards diseases for LINC01194 Gene - From: NovoSeek and GeneCards

Disorder Aliases PubMed IDs
pineocytoma
  • pinealocytoma
mesothelioma
malignant pleural mesothelioma
  • malignant mesothelioma of pleura
mesothelioma, somatic
  • malignant mesothelioma
- elite association

Relevant External Links for LINC01194

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LINC01194
genes like me logo Genes that share disorders with LINC01194: view

No data available for UniProtKB/Swiss-Prot and Genatlas for LINC01194 Gene

Publications for LINC01194 Gene

  1. Cross-talk between T-Ag presence and pRb family and p53/p73 signaling in mouse and human medulloblastoma. (PMID: 20336668) Caracciolo V. … Giordano A. (J. Cell. Biochem. 2010) 23 67
  2. Large T antigen promotes JC virus replication in G2-arrested cells by inducing ATM- and ATR-mediated G2 checkpoint signaling. (PMID: 19903823) Orba Y. … Sawa H. (J. Biol. Chem. 2010) 23 67
  3. Evidence for a role of the Simian Virus 40 in human breast carcinomas. (PMID: 18205041) Hachana M. … Korbi S. (Breast Cancer Res. Treat. 2009) 23 67
  4. [Bioinformatics scan of factors with inhibitory effect on lrp16 gene expression]. (PMID: 19698236) Chi X.H. … Dong M. (Zhongguo Shi Yan Xue Ye Xue Za Zhi 2009) 23 67
  5. Genetic and epigenetic characteristics of gastric cancers with JC virus T-antigen. (PMID: 19938198) Yamaoka S. … Shinomura Y. (World J. Gastroenterol. 2009) 23 67

Products for LINC01194 Gene

Sources for LINC01194 Gene

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