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Aliases for LINC01193 Gene

Subcategory (RNA class) for LINC01193 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for LINC01193 Gene

  • Long Intergenic Non-Protein Coding RNA 1193 2 3
  • Cancer/Testis Antigen 60 (Non-Protein Coding) 3
  • Cancer/Testis Antigen 60 2
  • CT60 3

External Ids for LINC01193 Gene

ORGUL Members for LINC01193 Gene

Previous HGNC Symbols for LINC01193 Gene

  • CT60

Previous GeneCards Identifiers for LINC01193 Gene

  • GC15P021156

Summaries for LINC01193 Gene

GeneCards Summary for LINC01193 Gene

LINC01193 (Long Intergenic Non-Protein Coding RNA 1193) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01193 Gene

Genomics for LINC01193 Gene

Genomic Location for LINC01193 Gene

Start:
20,940,438 bp from pter
End:
20,993,304 bp from pter
Size:
52,867 bases
Orientation:
Plus strand

Genomic View for LINC01193 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC01193 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01193 Gene

No data available for Regulatory Elements for LINC01193 Gene

Proteins for LINC01193 Gene

Post-translational modifications for LINC01193 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01193 Gene

Domains for LINC01193 Gene

Gene Families for LINC01193 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC01193: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01193 Gene

Function for LINC01193 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LINC01193 Gene

Localization for LINC01193 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01193 Gene

Pathways for LINC01193 Gene

SuperPathways for LINC01193 Gene

No Data Available

Interacting Proteins for LINC01193 Gene

Gene Ontology (GO) - Biological Process for LINC01193 Gene

None

No data available for Pathways by source for LINC01193 Gene

Transcripts for LINC01193 Gene

mRNA/cDNA for LINC01193 Gene

(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01193 Gene

No ASD Table

Relevant External Links for LINC01193 Gene

GeneLoc Exon Structure for
LINC01193
ECgene alternative splicing isoforms for
LINC01193

Expression for LINC01193 Gene

mRNA expression in normal human tissues for LINC01193 Gene

mRNA differential expression in normal tissues according to GTEx for LINC01193 Gene

This gene is overexpressed in Testis (50.0).
genes like me logo Genes that share expressions with LINC01193: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for LINC01193 Gene

Orthologs for LINC01193 Gene

Evolution for LINC01193 Gene

ENSEMBL:
Gene Tree for LINC01193 (if available)
TreeFam:
Gene Tree for LINC01193 (if available)

No data available for Orthologs for LINC01193 Gene

Paralogs for LINC01193 Gene

No data available for Paralogs for LINC01193 Gene

Variants for LINC01193 Gene

Sequence variations from dbSNP and Humsavar for LINC01193 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs1856 -- 20,987,470(+) AAATG(C/G)ATATC intron-variant
rs898607 -- 20,941,830(+) CTATC(C/G)GTGGC intron-variant
rs906951 -- 20,942,207(+) CTTTT(C/T)GCTCT intron-variant
rs1037878 -- 20,958,854(-) TGCCC(A/G)GGAGT intron-variant
rs1460895 -- 20,957,733(-) TCCAT(A/G)TTGCC intron-variant

Relevant External Links for LINC01193 Gene

HapMap Linkage Disequilibrium report
LINC01193

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for LINC01193 Gene

Disorders for LINC01193 Gene

No disorders were found for LINC01193 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for LINC01193 Gene

Publications for LINC01193 Gene

  1. Identification of cancer/testis-antigen genes by massively parallel signature sequencing. (PMID: 15905330) Chen Y.-T. … Simpson A.J.G. (Proc. Natl. Acad. Sci. U.S.A. 2005) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for LINC01193 Gene

Sources for LINC01193 Gene

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