Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LINC01121 Gene

Subcategory (RNA class) for LINC01121 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for LINC01121 Gene

  • Long Intergenic Non-Protein Coding RNA 1121 2 3
  • Putative Uncharacterized Protein UNQ6975/PRO21958 3
  • NGNL6975 3
  • UNQ6975 3

External Ids for LINC01121 Gene

ORGUL Members for LINC01121 Gene

Previous GeneCards Identifiers for LINC01121 Gene

  • GC02M045397

Summaries for LINC01121 Gene

GeneCards Summary for LINC01121 Gene

LINC01121 (Long Intergenic Non-Protein Coding RNA 1121) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01121 Gene

Genomics for LINC01121 Gene

Genomic Location for LINC01121 Gene

Start:
45,164,870 bp from pter
End:
45,323,295 bp from pter
Size:
158,426 bases
Orientation:
Minus strand

Genomic View for LINC01121 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC01121 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01121 Gene

No data available for Regulatory Elements for LINC01121 Gene

Proteins for LINC01121 Gene

Post-translational modifications for LINC01121 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01121 Gene

Domains for LINC01121 Gene

Gene Families for LINC01121 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC01121: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01121 Gene

Function for LINC01121 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LINC01121 Gene

Localization for LINC01121 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01121 Gene

Pathways for LINC01121 Gene

SuperPathways for LINC01121 Gene

No Data Available

Interacting Proteins for LINC01121 Gene

Gene Ontology (GO) - Biological Process for LINC01121 Gene

None

No data available for Pathways by source for LINC01121 Gene

Transcripts for LINC01121 Gene

mRNA/cDNA for LINC01121 Gene

(12) Selected AceView cDNA sequences:
(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01121 Gene

No ASD Table

Relevant External Links for LINC01121 Gene

GeneLoc Exon Structure for
LINC01121
ECgene alternative splicing isoforms for
LINC01121

Expression for LINC01121 Gene

mRNA expression in normal human tissues for LINC01121 Gene

mRNA differential expression in normal tissues according to GTEx for LINC01121 Gene

This gene is overexpressed in Testis (10.3) and Vagina (5.4).
genes like me logo Genes that share expressions with LINC01121: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for LINC01121 Gene

Orthologs for LINC01121 Gene

Evolution for LINC01121 Gene

ENSEMBL:
Gene Tree for LINC01121 (if available)
TreeFam:
Gene Tree for LINC01121 (if available)

No data available for Orthologs for LINC01121 Gene

Paralogs for LINC01121 Gene

No data available for Paralogs for LINC01121 Gene

Variants for LINC01121 Gene

Sequence variations from dbSNP and Humsavar for LINC01121 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs867766 -- 45,230,160(-) gccac(A/G)gactg intron-variant
rs869183 -- 45,238,660(+) AATGG(A/G)CAAAA intron-variant
rs883834 -- 45,229,972(-) AGGAA(A/G)GAGGG intron-variant
rs885553 -- 45,229,251(+) CGTCT(C/G)TGACA intron-variant
rs885554 -- 45,229,104(+) GAAAA(A/C)TGATG intron-variant

Relevant External Links for LINC01121 Gene

HapMap Linkage Disequilibrium report
LINC01121

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for LINC01121 Gene

Disorders for LINC01121 Gene

No disorders were found for LINC01121 Gene.

No data available for UniProtKB/Swiss-Prot for LINC01121 Gene

Publications for LINC01121 Gene

  1. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for LINC01121 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC01121
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for LINC01121
    • Block miRNA regulation of LINC01121 using miScript Target Protectors

    Sources for LINC01121 Gene

    Back to Top

    Content