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Aliases for LINC01081 Gene

Subcategory (RNA class) for LINC01081 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for LINC01081 Gene

  • Long Intergenic Non-Protein Coding RNA 1081 2 3
  • TCONS00024764 3 6
  • Long Non-Coding RNA TCONS_00024764 3
  • TCONS_00024764 3

External Ids for LINC01081 Gene

Previous GeneCards Identifiers for LINC01081 Gene

  • GC16U901580

Summaries for LINC01081 Gene

GeneCards Summary for LINC01081 Gene

LINC01081 (Long Intergenic Non-Protein Coding RNA 1081) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01081 Gene

Genomics for LINC01081 Gene

Genomic Location for LINC01081 Gene

Start:
86,225,580 bp from pter
End:
86,286,247 bp from pter
Size:
60,668 bases
Orientation:
Minus strand

Genomic View for LINC01081 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC01081 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01081 Gene

No data available for Regulatory Elements for LINC01081 Gene

Proteins for LINC01081 Gene

Post-translational modifications for LINC01081 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01081 Gene

Domains for LINC01081 Gene

Gene Families for LINC01081 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC01081: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01081 Gene

Function for LINC01081 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LINC01081 Gene

Localization for LINC01081 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01081 Gene

Pathways for LINC01081 Gene

SuperPathways for LINC01081 Gene

No Data Available

Interacting Proteins for LINC01081 Gene

Gene Ontology (GO) - Biological Process for LINC01081 Gene

None

No data available for Pathways by source for LINC01081 Gene

Transcripts for LINC01081 Gene

mRNA/cDNA for LINC01081 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01081 Gene

No ASD Table

Relevant External Links for LINC01081 Gene

GeneLoc Exon Structure for
LINC01081
ECgene alternative splicing isoforms for
LINC01081

Expression for LINC01081 Gene

mRNA expression in normal human tissues for LINC01081 Gene

mRNA differential expression in normal tissues according to GTEx for LINC01081 Gene

This gene is overexpressed in Testis (22.0) and Bladder (4.8).
genes like me logo Genes that share expressions with LINC01081: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for LINC01081 Gene

Orthologs for LINC01081 Gene

Evolution for LINC01081 Gene

ENSEMBL:
Gene Tree for LINC01081 (if available)
TreeFam:
Gene Tree for LINC01081 (if available)

No data available for Orthologs for LINC01081 Gene

Paralogs for LINC01081 Gene

No data available for Paralogs for LINC01081 Gene

Variants for LINC01081 Gene

Sequence variations from dbSNP and Humsavar for LINC01081 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs717482 -- 86,271,391(+) AAGAC(C/T)CTTTA intron-variant
rs747441 -- 86,226,384(-) GGGCT(A/G)GAAAC intron-variant
rs747442 -- 86,226,060(-) CAATC(C/T)ATTCA intron-variant
rs766039 -- 86,283,355(-) CTGGG(A/T)TGGAT intron-variant
rs879124 -- 86,281,356(-) AGGAT(G/T)AAGGT intron-variant

Relevant External Links for LINC01081 Gene

HapMap Linkage Disequilibrium report
LINC01081

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for LINC01081 Gene

Disorders for LINC01081 Gene

No disorders were found for LINC01081 Gene.

No data available for UniProtKB/Swiss-Prot for LINC01081 Gene

Publications for LINC01081 Gene

  1. Two deletions overlapping a distant FOXF1 enhancer unravel the role of lncRNA LINC01081 in etiology of alveolar capillary dysplasia with misalignment of pulmonary veins. (PMID: 24842713) Szafranski P. … Stankiewicz P. (Am. J. Med. Genet. A 2014) 2 3

Products for LINC01081 Gene

Sources for LINC01081 Gene

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