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Aliases for LINC01011 Gene

Subcategory (RNA class) for LINC01011 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for LINC01011 Gene

  • Long Intergenic Non-Protein Coding RNA 1011 2 3
  • DKFZP686I15217 3

External Ids for LINC01011 Gene

ORGUL Members for LINC01011 Gene

Summaries for LINC01011 Gene

GeneCards Summary for LINC01011 Gene

LINC01011 (Long Intergenic Non-Protein Coding RNA 1011) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01011 Gene

Genomics for LINC01011 Gene

Genomic Location for LINC01011 Gene

Start:
2,987,967 bp from pter
End:
2,991,173 bp from pter
Size:
3,207 bases
Orientation:
Plus strand

Genomic View for LINC01011 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC01011 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01011 Gene

No data available for Regulatory Elements for LINC01011 Gene

Proteins for LINC01011 Gene

Post-translational modifications for LINC01011 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01011 Gene

Domains for LINC01011 Gene

Gene Families for LINC01011 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC01011: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01011 Gene

Function for LINC01011 Gene

Phenotypes for LINC01011 Gene

GenomeRNAi human phenotypes for LINC01011:
genes like me logo Genes that share phenotypes with LINC01011: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LINC01011 Gene

Localization for LINC01011 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01011 Gene

Pathways for LINC01011 Gene

SuperPathways for LINC01011 Gene

No Data Available

Interacting Proteins for LINC01011 Gene

Gene Ontology (GO) - Biological Process for LINC01011 Gene

None

No data available for Pathways by source for LINC01011 Gene

Transcripts for LINC01011 Gene

mRNA/cDNA for LINC01011 Gene

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC01011
    • Block miRNA regulation of LINC01011 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for LINC01011

    Primer Products

    • OriGene qSTAR qPCR primer pairs in human,mouse,rat for LINC01011
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for LINC01011 Gene

    No ASD Table

    Relevant External Links for LINC01011 Gene

    GeneLoc Exon Structure for
    LINC01011
    ECgene alternative splicing isoforms for
    LINC01011

    Expression for LINC01011 Gene

    mRNA expression in normal human tissues for LINC01011 Gene

    mRNA expression in normal human tissues for LINC01011 Gene
    genes like me logo Genes that share expressions with LINC01011: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for LINC01011 Gene

    Orthologs for LINC01011 Gene

    Evolution for LINC01011 Gene

    ENSEMBL:
    Gene Tree for LINC01011 (if available)
    TreeFam:
    Gene Tree for LINC01011 (if available)

    No data available for Orthologs for LINC01011 Gene

    Paralogs for LINC01011 Gene

    No data available for Paralogs for LINC01011 Gene

    Variants for LINC01011 Gene

    Sequence variations from dbSNP and Humsavar for LINC01011 Gene

    SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
    rs2002 -- 2,990,991(-) GATAA(A/G)CGGTT nc-transcript-variant
    rs8583 -- 2,990,961(-) CAGGT(A/G)CAGAG nc-transcript-variant
    rs11201 -- 2,991,116(-) cgctc(A/G)aaatt nc-transcript-variant
    rs1054132 -- 2,990,660(+) TAGtg(G/T)gatac nc-transcript-variant
    rs1054133 -- 2,990,751(+) cccct(C/T)accca nc-transcript-variant

    Relevant External Links for LINC01011 Gene

    HapMap Linkage Disequilibrium report
    LINC01011

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for LINC01011 Gene

    Disorders for LINC01011 Gene

    No disorders were found for LINC01011 Gene.

    No data available for UniProtKB/Swiss-Prot for LINC01011 Gene

    Publications for LINC01011 Gene

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
    3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

    Products for LINC01011 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC01011
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for LINC01011
      • Block miRNA regulation of LINC01011 using miScript Target Protectors

      Sources for LINC01011 Gene

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