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Aliases for LINC01011 Gene

Subcategory (RNA class) for LINC01011 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01011 Gene

  • Long Intergenic Non-Protein Coding RNA 1011 2 3
  • DKFZP686I15217 3

External Ids for LINC01011 Gene

Summaries for LINC01011 Gene

GeneCards Summary for LINC01011 Gene

LINC01011 (Long Intergenic Non-Protein Coding RNA 1011) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01011 Gene

Genomics for LINC01011 Gene

Genomic Location for LINC01011 Gene

Chromosome:
6
Start:
2,987,967 bp from pter
End:
2,991,173 bp from pter
Size:
3,207 bases
Orientation:
Plus strand

Genomic View for LINC01011 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC01011 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01011 Gene

No data available for Regulatory Elements for LINC01011 Gene

Proteins for LINC01011 Gene

Post-translational modifications for LINC01011 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01011 Gene

Domains & Families for LINC01011 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01011 Gene

Function for LINC01011 Gene

Phenotypes for LINC01011 Gene

genes like me logo Genes that share phenotypes with LINC01011: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01011 Gene

Localization for LINC01011 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01011 Gene

Pathways & Interactions for LINC01011 Gene

SuperPathways for LINC01011 Gene

No Data Available

Interacting Proteins for LINC01011 Gene

Gene Ontology (GO) - Biological Process for LINC01011 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01011 Gene

Drugs & Compounds for LINC01011 Gene

No Compound Related Data Available

Transcripts for LINC01011 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01011 Gene

No ASD Table

Relevant External Links for LINC01011 Gene

GeneLoc Exon Structure for
LINC01011
ECgene alternative splicing isoforms for
LINC01011

Expression for LINC01011 Gene

mRNA expression in normal human tissues for LINC01011 Gene

mRNA expression in normal human tissues for LINC01011 Gene
genes like me logo Genes that share expression patterns with LINC01011: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for LINC01011 Gene

Orthologs for LINC01011 Gene

Evolution for LINC01011 Gene

ENSEMBL:
Gene Tree for LINC01011 (if available)
TreeFam:
Gene Tree for LINC01011 (if available)

No data available for Orthologs for LINC01011 Gene

Paralogs for LINC01011 Gene

No data available for Paralogs for LINC01011 Gene

Variants for LINC01011 Gene

Sequence variations from dbSNP and Humsavar for LINC01011 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs781191207 -- 2,986,384(+) GGCGC(A/G)TGCCA upstream-variant-2KB
rs771875944 -- 2,986,089(+) AAAGA(C/G)CTTTA upstream-variant-2KB
rs764004307 -- 2,986,340(+) TGAGC(A/G)ATTCT upstream-variant-2KB
rs759210969 -- 2,986,062(+) TTTCC(A/G)TTACC upstream-variant-2KB
rs758577122 -- 2,986,582(+) GCTAC(A/G)CTAGG upstream-variant-2KB

Relevant External Links for LINC01011 Gene

HapMap Linkage Disequilibrium report
LINC01011

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01011 Gene

Disorders for LINC01011 Gene

Relevant External Links for LINC01011

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LINC01011
genes like me logo Genes that share disorders with LINC01011: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01011 Gene

Publications for LINC01011 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 67

Products for LINC01011 Gene

Sources for LINC01011 Gene

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