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Aliases for LINC01011 Gene

Subcategory (RNA class) for LINC01011 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for LINC01011 Gene

  • Long Intergenic Non-Protein Coding RNA 1011 2 3
  • DKFZP686I15217 3

External Ids for LINC01011 Gene

ORGUL Members for LINC01011 Gene

Summaries for LINC01011 Gene

GeneCards Summary for LINC01011 Gene

LINC01011 (Long Intergenic Non-Protein Coding RNA 1011) is an RNA Gene, and belongs to the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01011 Gene

Genomics for LINC01011 Gene

Genomic Location for LINC01011 Gene

Start:
2,987,967 bp from pter
End:
2,991,173 bp from pter
Size:
3,207 bases
Orientation:
Plus strand

Genomic View for LINC01011 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC01011 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01011 Gene

No data available for Regulatory Elements for LINC01011 Gene

Proteins for LINC01011 Gene

Post-translational modifications for LINC01011 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01011 Gene

Domains for LINC01011 Gene

Gene Families for LINC01011 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC01011: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01011 Gene

Function for LINC01011 Gene

Phenotypes for LINC01011 Gene

GenomeRNAi human phenotypes for LINC01011:
genes like me logo Genes that share phenotypes with LINC01011: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LINC01011 Gene

Localization for LINC01011 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC01011 Gene

Pathways for LINC01011 Gene

SuperPathways for LINC01011 Gene

No Data Available

Interacting Proteins for LINC01011 Gene

Gene Ontology (GO) - Biological Process for LINC01011 Gene

None

No data available for Pathways by source for LINC01011 Gene

Transcripts for LINC01011 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01011 Gene

No ASD Table

Relevant External Links for LINC01011 Gene

GeneLoc Exon Structure for
LINC01011
ECgene alternative splicing isoforms for
LINC01011

Expression for LINC01011 Gene

mRNA expression in normal human tissues for LINC01011 Gene

mRNA expression in normal human tissues for LINC01011 Gene
genes like me logo Genes that share expressions with LINC01011: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for LINC01011 Gene

Orthologs for LINC01011 Gene

Evolution for LINC01011 Gene

ENSEMBL:
Gene Tree for LINC01011 (if available)
TreeFam:
Gene Tree for LINC01011 (if available)

No data available for Orthologs for LINC01011 Gene

Paralogs for LINC01011 Gene

No data available for Paralogs for LINC01011 Gene

Variants for LINC01011 Gene

Sequence variations from dbSNP and Humsavar for LINC01011 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs2002 -- 2,990,991(-) GATAA(A/G)CGGTT nc-transcript-variant
rs8583 -- 2,990,961(-) CAGGT(A/G)CAGAG nc-transcript-variant
rs11201 -- 2,991,116(-) cgctc(A/G)aaatt nc-transcript-variant
rs1054132 -- 2,990,660(+) TAGtg(G/T)gatac nc-transcript-variant
rs1054133 -- 2,990,751(+) cccct(C/T)accca nc-transcript-variant

Relevant External Links for LINC01011 Gene

HapMap Linkage Disequilibrium report
LINC01011

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for LINC01011 Gene

Disorders for LINC01011 Gene

No disorders were found for LINC01011 Gene.

No data available for UniProtKB/Swiss-Prot for LINC01011 Gene

Publications for LINC01011 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for LINC01011 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC01011
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for LINC01011
    • Block miRNA regulation of LINC01011 using miScript Target Protectors

    Sources for LINC01011 Gene

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