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Aliases for LINC00997 Gene

Subcategory (RNA class) for LINC00997 Gene

lncRNA

Quality Score for this RNA gene is

7

Aliases for LINC00997 Gene

  • Long Intergenic Non-Protein Coding RNA 997 2 3

External Ids for LINC00997 Gene

ORGUL Members for LINC00997 Gene

Previous GeneCards Identifiers for LINC00997 Gene

  • GC07P032808
  • GC07P032815
  • GC07P032760
  • GC07P032762
  • GC07P032766
  • GC07P032777
  • GC07P032782
  • GC07P032785

Summaries for LINC00997 Gene

GeneCards Summary for LINC00997 Gene

LINC00997 (Long Intergenic Non-Protein Coding RNA 997) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC00997 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00997 Gene

Genomics for LINC00997 Gene

Genomic Location for LINC00997 Gene

Chromosome:
7
Start:
32,758,286 bp from pter
End:
32,762,924 bp from pter
Size:
4,639 bases
Orientation:
Plus strand

Genomic View for LINC00997 Gene

Genes around LINC00997 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC00997 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC00997 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00997 Gene

ORGUL Member Location for LINC00997 Gene

ORGUL Member Location for LINC00997 gene

No data available for Regulatory Elements for LINC00997 Gene

Proteins for LINC00997 Gene

Post-translational modifications for LINC00997 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00997 Gene

Domains & Families for LINC00997 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC00997 Gene

Function for LINC00997 Gene

Phenotypes From GWAS Catalog for LINC00997 Gene

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00997 Gene

Localization for LINC00997 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC00997 Gene

Pathways & Interactions for LINC00997 Gene

SuperPathways for LINC00997 Gene

No Data Available

Interacting Proteins for LINC00997 Gene

Gene Ontology (GO) - Biological Process for LINC00997 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC00997 Gene

Drugs & Compounds for LINC00997 Gene

No Compound Related Data Available

Transcripts for LINC00997 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00997 Gene

No ASD Table

Relevant External Links for LINC00997 Gene

GeneLoc Exon Structure for
LINC00997
ECgene alternative splicing isoforms for
LINC00997

Expression for LINC00997 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC00997 Gene:

LINC00997
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC00997 Gene

Orthologs for LINC00997 Gene

No data available for Orthologs and Evolution for LINC00997 Gene

Paralogs for LINC00997 Gene

No data available for Paralogs for LINC00997 Gene

Variants for LINC00997 Gene

Sequence variations from dbSNP and Humsavar for LINC00997 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000582079 -- 32,757,513(+) GTTGC(C/T)GGGTG upstream-variant-2KB
rs1000949661 -- 32,756,331(+) TTCCT(G/T)TCTGC upstream-variant-2KB
rs1000952889 -- 32,762,254(+) CCGAG(C/T)GCGCA nc-transcript-variant
rs1001027829 -- 32,762,629(+) CCTGG(C/T)CCTGG nc-transcript-variant
rs1001636835 -- 32,762,949(+) TTTGT(C/T)TGCGA downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for LINC00997 Gene

Variant ID Type Subtype PubMed ID
dgv1080e201 CNV deletion 23290073
esv2734223 CNV deletion 23290073
esv2734224 CNV deletion 23290073
esv29452 CNV gain+loss 19812545
esv3541445 CNV deletion 23714750
esv3612747 CNV gain 21293372
esv3891096 CNV gain 25118596
nsv1124186 CNV deletion 24896259
nsv436907 CNV insertion 17901297
nsv830941 CNV gain 17160897
nsv966773 CNV duplication 23825009

Relevant External Links for LINC00997 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC00997

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC00997 Gene

Disorders for LINC00997 Gene

Relevant External Links for LINC00997

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LINC00997

No disorders were found for LINC00997 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC00997 Gene

Publications for LINC00997 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60

Products for LINC00997 Gene

Sources for LINC00997 Gene

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