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Aliases for LINC00869 Gene

Subcategory (RNA class) for LINC00869 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for LINC00869 Gene

  • Long Intergenic Non-Protein Coding RNA 869 2 3
  • FAM91A2 3 4
  • Family With Sequence Similarity 91, Member A2 3
  • KIAA0493 4

External Ids for LINC00869 Gene

Summaries for LINC00869 Gene

GeneCards Summary for LINC00869 Gene

LINC00869 (Long Intergenic Non-Protein Coding RNA 869) is a RNA Gene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00869 Gene

Genomics for LINC00869 Gene

Genomic Location for LINC00869 Gene

Start:
149,606,334 bp from pter
End:
149,701,161 bp from pter
Size:
94,828 bases
Orientation:
Plus strand

Genomic View for LINC00869 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC00869 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00869 Gene

No data available for Regulatory Elements for LINC00869 Gene

Proteins for LINC00869 Gene

  • Protein details for LINC00869 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C866-F91A2_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by LINC00869
    Protein Accession:
    P0C866
    Secondary Accessions:

    Protein attributes for LINC00869 Gene

    Size:
    280 amino acids
    Molecular mass:
    30847 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LINC00869 Gene

Proteomics data for LINC00869 Gene at MOPED

Post-translational modifications for LINC00869 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00869 Gene

Domains for LINC00869 Gene

Gene Families for LINC00869 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for LINC00869 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

F91A2_HUMAN
Family:
  • Belongs to the FAM91 family.:
    • P0C866
genes like me logo Genes that share domains with LINC00869: view

Function for LINC00869 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LINC00869 Gene

Localization for LINC00869 Gene

No data available for Gene Ontology (GO) - Cellular Components for LINC00869 Gene

Pathways for LINC00869 Gene

SuperPathways for LINC00869 Gene

No Data Available

Interacting Proteins for LINC00869 Gene

Gene Ontology (GO) - Biological Process for LINC00869 Gene

None

No data available for Pathways by source for LINC00869 Gene

Transcripts for LINC00869 Gene

Unigene Clusters for LINC00869 Gene

Long intergenic non-protein coding RNA 869:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00869 Gene

No ASD Table

Relevant External Links for LINC00869 Gene

GeneLoc Exon Structure for
LINC00869
ECgene alternative splicing isoforms for
LINC00869

Expression for LINC00869 Gene

mRNA expression in normal human tissues for LINC00869 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for LINC00869 Gene

SOURCE GeneReport for Unigene cluster for LINC00869 Gene Hs.662922

genes like me logo Genes that share expressions with LINC00869: view

Orthologs for LINC00869 Gene

Evolution for LINC00869 Gene

ENSEMBL:
Gene Tree for LINC00869 (if available)
TreeFam:
Gene Tree for LINC00869 (if available)

No data available for Orthologs for LINC00869 Gene

Paralogs for LINC00869 Gene

Selected SIMAP similar genes for LINC00869 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with LINC00869: view

No data available for Paralogs for LINC00869 Gene

Variants for LINC00869 Gene

Sequence variations from dbSNP and Humsavar for LINC00869 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs479085 -- 149,676,543(+) TTTGA(G/T)CATGC nc-transcript-variant
rs481866 -- 149,676,840(+) ATTTA(C/T)GTTTA nc-transcript-variant
rs482887 -- 149,676,960(+) GGTCA(C/T)GATCC nc-transcript-variant
rs565668 -- 149,676,223(+) ATTTG(A/G)ATCAA nc-transcript-variant
rs573958 -- 149,680,014(+) TTCCC(A/G)ACTTC downstream-variant-500B

Relevant External Links for LINC00869 Gene

HapMap Linkage Disequilibrium report
LINC00869

No data available for Structural Variations from Database of Genomic Variants (DGV) for LINC00869 Gene

Disorders for LINC00869 Gene

No disorders were found for LINC00869 Gene.

No data available for UniProtKB/Swiss-Prot for LINC00869 Gene

Publications for LINC00869 Gene

  1. Characterization of cDNA clones in size-fractionated cDNA libraries from human brain. (PMID: 9455484) Seki N. … Ohara O. (DNA Res. 1997) 2 3 4
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  5. A COFRADIC protocol to study protein ubiquitination. (PMID: 24816145) Stes E. … Gevaert K. (J. Proteome Res. 2014) 3

Products for LINC00869 Gene

Sources for LINC00869 Gene

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