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Aliases for LINC00868 Gene

Subcategory (RNA class) for LINC00868 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LINC00868 Gene

  • Long Intergenic Non-Protein Coding RNA 868 2 3 5
  • Chromosome 17 Open Reading Frame 52 2
  • C17orf52 3

External Ids for LINC00868 Gene

Previous HGNC Symbols for LINC00868 Gene

  • C17orf52

Previous GeneCards Identifiers for LINC00868 Gene

  • GC17P074848

Summaries for LINC00868 Gene

GeneCards Summary for LINC00868 Gene

LINC00868 (Long Intergenic Non-Protein Coding RNA 868) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00868 Gene

Genomics for LINC00868 Gene

Regulatory Elements for LINC00868 Gene

Enhancers for LINC00868 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G076845 0.9 ENCODE 0.7 -4.5 -4538 0.9 CBX3 ATF1 TBL1XR1 TCF12 ZNF121 GATA2 CREM SMARCA5 JUNB ZNF592 MFSD11 MXRA7 LINC00868 LINC02080
GH17G076839 1.2 Ensembl ENCODE 0.4 -10.2 -10152 0.8 HDGF FOXA2 ARID4B ZNF2 ZNF143 MIER2 REST TBX21 KAT8 SMARCA4 MXRA7 MFSD11 LINC00868 LINC02080
GH17G076841 1 Ensembl ENCODE 0.4 -8.1 -8081 1.3 PKNOX1 TAL1 ZNF140 ZIC2 ZNF48 GLIS2 ZFHX2 ZNF652 EZH2 EGR2 MXRA7 LINC00868 LINC02080
GH17G076842 0.8 FANTOM5 0.4 -9.2 -9240 0.4 ZNF48 ZEB1 ZFHX2 ZNF366 KLF8 EZH2 EGR2 ZNF202 MAZ ZBTB2 ENSG00000267342 TRIM65 MGAT5B UBE2O LINC00868 LINC02080
GH17G076816 0.7 ENCODE 0.3 -33.5 -33463 0.2 CTCF ZNF654 RB1 BHLHE40 TRIM22 ZBTB8A REST ZIC2 RAD21 ZNF579 LINC02080 LINC00868
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LINC00868 on UCSC Golden Path with GeneCards custom track

Genomic Location for LINC00868 Gene

76,850,176 bp from pter
76,861,836 bp from pter
11,661 bases
Plus strand

Genomic View for LINC00868 Gene

Genes around LINC00868 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC00868 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC00868 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00868 Gene

Proteins for LINC00868 Gene

Post-translational modifications for LINC00868 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00868 Gene

Domains & Families for LINC00868 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC00868 Gene

Function for LINC00868 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00868 Gene

Localization for LINC00868 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC00868 Gene

Pathways & Interactions for LINC00868 Gene

SuperPathways for LINC00868 Gene

No Data Available

Interacting Proteins for LINC00868 Gene

Gene Ontology (GO) - Biological Process for LINC00868 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC00868 Gene

Drugs & Compounds for LINC00868 Gene

No Compound Related Data Available

Transcripts for LINC00868 Gene

mRNA/cDNA for LINC00868 Gene

(1) Additional mRNA sequences :
(10) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LINC00868 Gene

Long intergenic non-protein coding RNA 868:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00868 Gene

No ASD Table

Relevant External Links for LINC00868 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC00868 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC00868 Gene

mRNA differential expression in normal tissues according to GTEx for LINC00868 Gene

This gene is overexpressed in Testis (x32.7) and Skin - Not Sun Exposed (Suprapubic) (x5.8).

NURSA nuclear receptor signaling pathways regulating expression of LINC00868 Gene:


SOURCE GeneReport for Unigene cluster for LINC00868 Gene:

genes like me logo Genes that share expression patterns with LINC00868: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC00868 Gene

Orthologs for LINC00868 Gene

Evolution for LINC00868 Gene

Gene Tree for LINC00868 (if available)
Gene Tree for LINC00868 (if available)

No data available for Orthologs for LINC00868 Gene

Paralogs for LINC00868 Gene

No data available for Paralogs for LINC00868 Gene

Variants for LINC00868 Gene

Sequence variations from dbSNP and Humsavar for LINC00868 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1000297782 -- 76,858,119(+) CTGGG(C/G/T)GACAC intron-variant
rs1000845455 -- 76,858,851(+) ATCCC(A/G)CCTTG intron-variant
rs1001276082 -- 76,859,056(+) GGGCT(A/C)GCAGA intron-variant
rs1001576765 -- 76,857,638(+) TCACC(A/G)CTCCG intron-variant
rs1001849363 -- 76,858,433(+) ATAAC(-/TCTT)TCAAC intron-variant

Relevant External Links for LINC00868 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC00868 Gene

Disorders for LINC00868 Gene

Relevant External Links for LINC00868

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for LINC00868 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC00868 Gene

Publications for LINC00868 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64
  2. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington J.J. … Ducar M. (Nat. Biotechnol. 2001) 3 64

Products for LINC00868 Gene

Sources for LINC00868 Gene

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