Aliases for LINC00696 Gene
Subcategory (RNA class) for LINC00696 Gene
lncRNA
Quality Score for this RNA gene is
2
Aliases for LINC00696 Gene
ORGUL Members for LINC00696 Gene
Previous HGNC Symbols for LINC00696 Gene
- C3orf74
Summaries for LINC00696 Gene
GeneCards Summary for LINC00696 Gene
LINC00696 (Long Intergenic Non-Protein Coding RNA 696) is an RNA Gene, and is affiliated with the lncRNA class.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00696 Gene
Genomics for LINC00696 Gene
Regulatory Elements for LINC00696 Gene
Enhancers for LINC00696 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH03G052061 | 1.3 | Ensembl ENCODE dbSUPER | 0.7 | +2.5 | 2526 | 2.5 | CTCF JUN KLF17 FOSL1 ZNF23 ZFHX2 EED ZMIZ1 FOS IKZF2 | GPR62 LINC00696 DUSP7 |
| GH03G052067 | 1.1 | Ensembl ENCODE dbSUPER | 0.7 | -4.3 | -4278 | 4.7 | CTCF NR2F1 REST ZNF623 CBX5 HNF4A FOS FOXP2 KDM1A | LINC00696 POC1A |
| GH03G052086 | 1.7 | FANTOM5 Ensembl ENCODE dbSUPER | 0.3 | -24.5 | -24452 | 6.2 | HDGF RB1 ARID4B ZSCAN9 RAD21 EGR1 SCRT2 ZNF143 FOS RELB | GPR62 DUSP7 PCBP4 ABHD14B PPM1M GLYCTK LINC00696 POC1A |
| GH03G052075 | 1.2 | Ensembl ENCODE dbSUPER | 0.4 | -12.0 | -12039 | 2.6 | CTCF RFX1 MAX ZIC2 NR2F2 RARA SCRT2 CEBPA FOXJ2 PRDM10 | GPR62 ABHD14B LINC00696 POC1A |
| GH03G052081 | 1.2 | ENCODE dbSUPER | 0.4 | -16.2 | -16208 | 0.2 | ELF3 HDGF FOXA2 CBX3 ARID4B ZNF48 ZSCAN9 RARA TCF12 GATA4 | LINC00696 POC1A |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around LINC00696 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for LINC00696 Gene
- Chromosome:
- 3
- Start:
- 52,062,094 bp from pter
- End:
- 52,065,112 bp from pter
- Size:
- 3,019 bases
- Orientation:
- Minus strand
Genomic View for LINC00696 Gene
Genes around LINC00696 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 3p21.2 by Entrez Gene
- 3p21.1 by HGNC
LINC00696 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC00696 Gene
Proteins for LINC00696 Gene
-
Protein details for LINC00696 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q6ZRV3-CC074_HUMAN
- Recommended name:
- Putative uncharacterized protein encoded by LINC00696
- Protein Accession:
- Q6ZRV3
Protein attributes for LINC00696 Gene
- Size:
- 163 amino acids
- Molecular mass:
- 16900 Da
- Quaternary structure:
- No Data Available
Protein Expression for LINC00696 Gene
Post-translational modifications for LINC00696 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for LINC00696
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC00696
- Origene Custom Protein Services for LINC00696
- Search GeneTex for Proteins for LINC00696
No data available for DME Specific Peptides for LINC00696 Gene
Domains & Families for LINC00696 Gene
Protein Domains for LINC00696 Gene
- ProtoNet:
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC00696 Gene
Function for LINC00696 Gene
Phenotypes for LINC00696 Gene
- GenomeRNAi human phenotypes for LINC00696:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LINC00696
-
- Search ViGene Biosciences for LINC00696
CRISPR Products
- Browse CRISPR knockouts for LINC00696
miRNA Products
- Search ViGene Biosciences for LINC00696
Inhibitory RNA Products
- Origene siRNA and RNAi products in human, mouse, rat for LINC00696
- Browse OriGene Inhibitory RNA Products For LINC00696
- Search ViGene Biosciences for LINC00696
Clone Products
- GenScript: Custom all cDNA clones Services for LINC00696
- VectorBuilder custom plasmid, inducible vectors for LINC00696
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LINC00696
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00696 Gene
Localization for LINC00696 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC00696 Gene
Transcripts for LINC00696 Gene
mRNA/cDNA for LINC00696 Gene
- (1) REFSEQ mRNAs :
- (2) Additional mRNA sequences :
Unigene Clusters for LINC00696 Gene
CRISPR Products
- Browse CRISPR knockouts for LINC00696
miRNA Products
- Search ViGene Biosciences for LINC00696
Inhibitory RNA Products
- Origene siRNA and RNAi products in human, mouse, rat for LINC00696
- Browse OriGene Inhibitory RNA Products For LINC00696
- Search ViGene Biosciences for LINC00696
Clone Products
- GenScript: Custom all cDNA clones Services for LINC00696
- VectorBuilder custom plasmid, inducible vectors for LINC00696
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LINC00696
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Expression for LINC00696 Gene
mRNA differential expression in normal tissues according to GTEx for LINC00696 Gene
This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x18.5), Skin - Sun Exposed (Lower leg) (x11.4), Minor Salivary Gland (x5.7), and Esophagus - Mucosa (x5.7).
This gene is overexpressed in Adipocyte (69.0).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for LINC00696 Gene
NURSA nuclear receptor signaling pathways regulating expression of LINC00696 Gene:
LINC00696SOURCE GeneReport for Unigene cluster for LINC00696 Gene:
Hs.640106Primer Products
-
OriGene qPCR primer pairs for LINC00696
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC00696 Gene
Orthologs for LINC00696 Gene
No data available for Orthologs and Evolution for LINC00696 Gene
Paralogs for LINC00696 Gene
No data available for Paralogs for LINC00696 Gene
Variants for LINC00696 Gene
| SNP ID | Clin | Chr 03 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1000057843 | -- | 52,063,647(+) | CCAGC(C/T)CGGGC | nc-transcript-variant | |
| rs1000639564 | -- | 52,067,049(+) | AGAGG(A/G)GGCCT | upstream-variant-2KB | |
| rs1002082286 | -- | 52,062,319(+) | CTGTG(G/T)CTTCT | nc-transcript-variant | |
| rs1002270046 | -- | 52,064,142(+) | GGGCG(-/AC)ACAAA | nc-transcript-variant | |
| rs1002638338 | -- | 52,065,775(+) | CTGGG(A/C)CCCTG | upstream-variant-2KB |
Gene Damage Index Score:
0.11;
2.47% of all genes are more intolerant (likely to be disease-causing)
Relevant External Links for LINC00696 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC00696
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for LINC00696 Gene
Disorders for LINC00696 Gene
Relevant External Links for LINC00696
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- LINC00696
No disorders were found for LINC00696 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC00696 Gene
Publications for LINC00696 Gene
- The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 4 64
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4 64
Products for LINC00696 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC00696
- Origene Custom Protein Services for LINC00696
- Origene siRNA and RNAi products in human, mouse, rat for LINC00696
- Browse OriGene Inhibitory RNA Products For LINC00696
- OriGene qPCR primer pairs for LINC00696
- Browse CRISPR knockouts for LINC00696
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC00696
- GenScript: Custom all cDNA clones Services for LINC00696
- GenScript Custom Purified and Recombinant Proteins Services for LINC00696
- GenScript Custom Assay Services for LINC00696
- GenScript Custom overexpressing Cell Line Services for LINC00696
- Browse GenScript CRISPR for LINC00696
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for LINC00696
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Search GeneTex for Antibodies for LINC00696
- Search GeneTex for Proteins for LINC00696
- Search ViGene Biosciences for LINC00696
- Cyagen custom Knockout/knockin (KOKI) mouse models for LINC00696
- VectorBuilder custom plasmid, inducible vectors for LINC00696
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LINC00696
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for LINC00696 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer