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Aliases for LINC00696 Gene

Subcategory (RNA class) for LINC00696 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for LINC00696 Gene

  • Long Intergenic Non-Protein Coding RNA 696 2 3
  • C3orf74 3 4
  • Chromosome 3 Open Reading Frame 74 2

External Ids for LINC00696 Gene

ORGUL Members for LINC00696 Gene

Previous HGNC Symbols for LINC00696 Gene

  • C3orf74

Summaries for LINC00696 Gene

GeneCards Summary for LINC00696 Gene

LINC00696 (Long Intergenic Non-Protein Coding RNA 696) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00696 Gene

Genomics for LINC00696 Gene

Genomic Location for LINC00696 Gene

Start:
52,062,094 bp from pter
End:
52,065,112 bp from pter
Size:
3,019 bases
Orientation:
Minus strand

Genomic View for LINC00696 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC00696 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00696 Gene

No data available for Regulatory Elements for LINC00696 Gene

Proteins for LINC00696 Gene

  • Protein details for LINC00696 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZRV3-CC074_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by LINC00696
    Protein Accession:
    Q6ZRV3
    Secondary Accessions:

    Protein attributes for LINC00696 Gene

    Size:
    163 amino acids
    Molecular mass:
    16900 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LINC00696 Gene

Proteomics data for LINC00696 Gene at MOPED

Post-translational modifications for LINC00696 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00696 Gene

Domains for LINC00696 Gene

Gene Families for LINC00696 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for LINC00696 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC00696: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC00696 Gene

Function for LINC00696 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LINC00696 Gene

Localization for LINC00696 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC00696 Gene

Pathways for LINC00696 Gene

SuperPathways for LINC00696 Gene

No Data Available

Interacting Proteins for LINC00696 Gene

Gene Ontology (GO) - Biological Process for LINC00696 Gene

None

No data available for Pathways by source for LINC00696 Gene

Transcripts for LINC00696 Gene

mRNA/cDNA for LINC00696 Gene

(2) Additional mRNA sequences :
(1) REFSEQ mRNAs :

Unigene Clusters for LINC00696 Gene

Long intergenic non-protein coding RNA 696:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00696 Gene

No ASD Table

Relevant External Links for LINC00696 Gene

GeneLoc Exon Structure for
LINC00696
ECgene alternative splicing isoforms for
LINC00696

Expression for LINC00696 Gene

mRNA expression in normal human tissues for LINC00696 Gene

mRNA differential expression in normal tissues according to GTEx for LINC00696 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (18.5), Skin - Sun Exposed (Lower leg) (11.4), Minor Salivary Gland (5.7), and Esophagus - Mucosa (5.7).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for LINC00696 Gene

SOURCE GeneReport for Unigene cluster for LINC00696 Gene Hs.640106

genes like me logo Genes that share expressions with LINC00696: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for LINC00696 Gene

Orthologs for LINC00696 Gene

No data available for Orthologs and Evolution for LINC00696 Gene

Paralogs for LINC00696 Gene

No data available for Paralogs for LINC00696 Gene

Variants for LINC00696 Gene

Sequence variations from dbSNP and Humsavar for LINC00696 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs4687608 -- 52,063,044(+) GGCAG(C/T)GGGCT nc-transcript-variant
rs9860982 -- 52,062,416(+) CAAGC(C/T)CTCCC nc-transcript-variant
rs17051957 -- 52,065,425(+) GAAGC(C/T)GGGAA upstream-variant-2KB
rs34871728 -- 52,064,093(+) GAGGG(-/G)CAAAG nc-transcript-variant
rs35755202 -- 52,065,358(+) CACGG(-/G)CCCCG upstream-variant-2KB

Relevant External Links for LINC00696 Gene

HapMap Linkage Disequilibrium report
LINC00696

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for LINC00696 Gene

Disorders for LINC00696 Gene

No disorders were found for LINC00696 Gene.

No data available for UniProtKB/Swiss-Prot for LINC00696 Gene

Publications for LINC00696 Gene

  1. The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4

Products for LINC00696 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC00696
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for LINC00696
    • Block miRNA regulation of LINC00696 using miScript Target Protectors

    Sources for LINC00696 Gene

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