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Aliases for LINC00696 Gene

Subcategory (RNA class) for LINC00696 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for LINC00696 Gene

  • Long Intergenic Non-Protein Coding RNA 696 2 3
  • C3orf74 3 4
  • Chromosome 3 Open Reading Frame 74 2

External Ids for LINC00696 Gene

ORGUL Members for LINC00696 Gene

Previous HGNC Symbols for LINC00696 Gene

  • C3orf74

Summaries for LINC00696 Gene

GeneCards Summary for LINC00696 Gene

LINC00696 (Long Intergenic Non-Protein Coding RNA 696) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00696 Gene

Genomics for LINC00696 Gene

Genomic Location for LINC00696 Gene

Chromosome:
3
Start:
52,062,094 bp from pter
End:
52,065,112 bp from pter
Size:
3,019 bases
Orientation:
Minus strand

Genomic View for LINC00696 Gene

Genes around LINC00696 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC00696 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC00696 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00696 Gene

No data available for Regulatory Elements for LINC00696 Gene

Proteins for LINC00696 Gene

  • Protein details for LINC00696 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZRV3-CC074_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by LINC00696
    Protein Accession:
    Q6ZRV3

    Protein attributes for LINC00696 Gene

    Size:
    163 amino acids
    Molecular mass:
    16900 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LINC00696 Gene

Proteomics data for LINC00696 Gene at MOPED

Post-translational modifications for LINC00696 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00696 Gene

Domains & Families for LINC00696 Gene

Protein Domains for LINC00696 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC00696: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC00696 Gene

Function for LINC00696 Gene

Phenotypes for LINC00696 Gene

GenomeRNAi human phenotypes for LINC00696:
genes like me logo Genes that share phenotypes with LINC00696: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00696 Gene

Localization for LINC00696 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC00696 Gene

Pathways & Interactions for LINC00696 Gene

SuperPathways for LINC00696 Gene

No Data Available

Interacting Proteins for LINC00696 Gene

Gene Ontology (GO) - Biological Process for LINC00696 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC00696 Gene

Drugs & Compounds for LINC00696 Gene

No Compound Related Data Available

Transcripts for LINC00696 Gene

mRNA/cDNA for LINC00696 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :

Unigene Clusters for LINC00696 Gene

Long intergenic non-protein coding RNA 696:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00696 Gene

No ASD Table

Relevant External Links for LINC00696 Gene

GeneLoc Exon Structure for
LINC00696
ECgene alternative splicing isoforms for
LINC00696

Expression for LINC00696 Gene

mRNA expression in normal human tissues for LINC00696 Gene

mRNA differential expression in normal tissues according to GTEx for LINC00696 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x18.5), Skin - Sun Exposed (Lower leg) (x11.4), Minor Salivary Gland (x5.7), and Esophagus - Mucosa (x5.7).

Protein differential expression in normal tissues from HIPED for LINC00696 Gene

This gene is overexpressed in Adipocyte (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for LINC00696 Gene



SOURCE GeneReport for Unigene cluster for LINC00696 Gene Hs.640106

genes like me logo Genes that share expression patterns with LINC00696: view

Protein tissue co-expression partners for LINC00696 Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for LINC00696 Gene

Orthologs for LINC00696 Gene

No data available for Orthologs and Evolution for LINC00696 Gene

Paralogs for LINC00696 Gene

No data available for Paralogs for LINC00696 Gene

Variants for LINC00696 Gene

Sequence variations from dbSNP and Humsavar for LINC00696 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs4687608 -- 52,063,044(+) GGCAG(C/T)GGGCT nc-transcript-variant
rs9860982 -- 52,062,416(+) CAAGC(C/T)CTCCC nc-transcript-variant
rs17051957 -- 52,065,425(+) GAAGC(C/T)GGGAA upstream-variant-2KB
rs34871728 -- 52,064,093(+) GAGGG(-/G)CAAAG nc-transcript-variant
rs57335685 -- 52,064,442(+) TCCTC(C/T)ACAGA nc-transcript-variant

Variation tolerance for LINC00696 Gene

Gene Damage Index Score: 0.11; 2.47% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for LINC00696 Gene

HapMap Linkage Disequilibrium report
LINC00696

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for LINC00696 Gene

Disorders for LINC00696 Gene

Relevant External Links for LINC00696

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LINC00696

No disorders were found for LINC00696 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC00696 Gene

Publications for LINC00696 Gene

  1. The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 4 67

Products for LINC00696 Gene

Sources for LINC00696 Gene

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