Aliases for LINC00696 Gene
Subcategory (RNA class) for LINC00696 Gene
lncRNA
Quality Score for this RNA gene is
2
Aliases for LINC00696 Gene
ORGUL Members for LINC00696 Gene
Previous HGNC Symbols for LINC00696 Gene
- C3orf74
Summaries for LINC00696 Gene
GeneCards Summary for LINC00696 Gene
LINC00696 (Long Intergenic Non-Protein Coding RNA 696) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LINC00696 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00696 Gene
Genomics for LINC00696 Gene
GeneHancer (GH) Regulatory Elements for LINC00696 Gene
Promoters and enhancers for LINC00696 Gene
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH03I052061 | Enhancer | 1.1 | Ensembl ENCODE dbSUPER | 0.8 | +2.5 | 2526 | 2.5 | ZBTB6 JUN KLF17 FOSL1 ZFHX2 ZNF23 FOSL2 FOS MAFK IKZF2 | NEK4 GPR62 LINC00696 DUSP7 | |
GH03I052067 | Enhancer | 0.9 | Ensembl ENCODE dbSUPER | 0.8 | -4.3 | -4277 | 4.7 | NR2F1 FOXP2 RCOR1 FOS ZNF623 CHD2 | LINC00696 POC1A | |
GH03I052081 | Enhancer | 1.1 | ENCODE dbSUPER | 0.4 | -16.2 | -16208 | 0.2 | HDGF FOXA2 ARID4B ZNF48 TCF12 RXRA SP5 NCOA1 ZNF623 PPARG | LINC00696 POC1A | |
GH03I052086 | Enhancer | 1.4 | FANTOM5 Ensembl ENCODE dbSUPER | 0.3 | -24.5 | -24451 | 6.2 | USF1 ZNF449 JUN EBF1 CEBPG ZIC2 POLR2A EGR1 SCRT2 PRDM10 | GPR62 DUSP7 PCBP4 ABHD14B PPM1M GLYCTK LINC00696 POC1A | |
GH03I052153 | Promoter/Enhancer | 2.1 | EPDnew Ensembl ENCODE | 0.2 | -89.4 | -89353 | 2.6 | FOXA2 SMAD1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 POLR2B | POC1A PBRM1 RRP9 DUSP7 ABHD14A-ACY1 ABHD14B PCBP4 ACY1 WDR82 GPR62 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around LINC00696 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for LINC00696 Gene
Genomic Locations for LINC00696 Gene
- chr3:52,062,094-52,065,112
- (GRCh38/hg38)
- Size:
- 3,019 bases
- Orientation:
- Minus strand
- chr3:52,096,110-52,099,128
- (GRCh37/hg19)
Genomic View for LINC00696 Gene
Genes around LINC00696 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 3p21.2 by Entrez Gene
- 3p21.1 by HGNC
LINC00696 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)


RefSeq DNA sequence for LINC00696 Gene
Proteins for LINC00696 Gene
-
Protein details for LINC00696 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q6ZRV3-CC074_HUMAN
- Recommended name:
- Putative uncharacterized protein encoded by LINC00696
- Protein Accession:
- Q6ZRV3
Protein attributes for LINC00696 Gene
- Size:
- 163 amino acids
- Molecular mass:
- 16900 Da
- Quaternary structure:
- No Data Available
Protein Expression for LINC00696 Gene
Post-translational modifications for LINC00696 Gene
No Post-translational modifications
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC00696
- Origene Custom Protein Services for LINC00696
- Search GeneTex for Proteins for LINC00696
Assay Products
No data available for DME Specific Peptides for LINC00696 Gene
Domains & Families for LINC00696 Gene
Protein Domains for LINC00696 Gene
- ProtoNet:
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC00696 Gene
Function for LINC00696 Gene
Phenotypes for LINC00696 Gene
- GenomeRNAi human phenotypes for LINC00696:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LINC00696
-
- Search ViGene Biosciences for LINC00696
CRISPR Products
- Browse CRISPR knockouts for LINC00696
- genomics-online: gRNA clones - Search results for available LINC00696 gene related products
- Applied Biological Materials CRISPR for LINC00696
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for LINC00696
Inhibitory RNA Products
- Origene sirna and RNAi products in human, mouse, rat for LINC00696
- Browse OriGene Inhibitory RNA Products For LINC00696
- genomics-online: shRNA clones - Search results for available LINC00696 gene related products
- Search ViGene Biosciences for LINC00696
Clone Products
- GenScript: Custom all cDNA clones Services for LINC00696
- VectorBuilder custom plasmid, inducible vectors for LINC00696
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LINC00696
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- genomics-online: cdna clones - Search results for available LINC00696 gene related products
- orf clones - Search results for available LINC00696 gene related products
- Applied Biological Materials Clones for LINC00696
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00696 Gene
Localization for LINC00696 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC00696 Gene
Transcripts for LINC00696 Gene
mRNA/cDNA for LINC00696 Gene
- (1) REFSEQ mRNAs :
- (2) Additional mRNA sequences :
Unigene Clusters for LINC00696 Gene
CRISPR Products
- Browse CRISPR knockouts for LINC00696
- genomics-online: gRNA clones - Search results for available LINC00696 gene related products
- Applied Biological Materials CRISPR for LINC00696
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for LINC00696
Inhibitory RNA Products
- Origene sirna and RNAi products in human, mouse, rat for LINC00696
- Browse OriGene Inhibitory RNA Products For LINC00696
- genomics-online: shRNA clones - Search results for available LINC00696 gene related products
- Search ViGene Biosciences for LINC00696
Clone Products
- GenScript: Custom all cDNA clones Services for LINC00696
- VectorBuilder custom plasmid, inducible vectors for LINC00696
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LINC00696
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- genomics-online: cdna clones - Search results for available LINC00696 gene related products
- orf clones - Search results for available LINC00696 gene related products
- Applied Biological Materials Clones for LINC00696
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for LINC00696 Gene
mRNA differential expression in normal tissues according to GTEx for LINC00696 Gene
This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x18.5), Skin - Sun Exposed (Lower leg) (x11.4), Minor Salivary Gland (x5.7), and Esophagus - Mucosa (x5.7).
This gene is overexpressed in Adipocyte (69.0).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for LINC00696 Gene
NURSA nuclear receptor signaling pathways regulating expression of LINC00696 Gene:
LINC00696SOURCE GeneReport for Unigene cluster for LINC00696 Gene:
Hs.640106Primer Products
-
OriGene qPCR primer pairs for LINC00696
- genomics-online: primer clones - Search results for available LINC00696 gene related products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC00696 Gene
Orthologs for LINC00696 Gene
No data available for Orthologs and Evolution for LINC00696 Gene
Paralogs for LINC00696 Gene
No data available for Paralogs for LINC00696 Gene
Variants for LINC00696 Gene
SNP ID | Clin | Chr 03 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
rs1000057843 | -- | 52,063,647(-) | C/T | non_coding_transcript_variant | |
rs1000639564 | -- | 52,067,049(-) | G/A | upstream_transcript_variant | |
rs1002082286 | -- | 52,062,319(-) | G/T | non_coding_transcript_variant | |
rs1002270046 | -- | 52,064,143(-) | ACA/ACACA | non_coding_transcript_variant | |
rs1002638338 | -- | 52,065,775(-) | C/A | upstream_transcript_variant |
Gene Damage Index Score:
0.11;
2.47% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for LINC00696 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC00696
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for LINC00696 Gene
Disorders for LINC00696 Gene
Additional Disease Information for LINC00696
No disorders were found for LINC00696 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC00696 Gene
Publications for LINC00696 Gene
- The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny DM … Gibbs RA (Nature 2006) 4 58
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 4 58
Products for LINC00696 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC00696
- Origene Custom Protein Services for LINC00696
- Origene sirna and RNAi products in human, mouse, rat for LINC00696
- Browse OriGene Inhibitory RNA Products For LINC00696
- OriGene qPCR primer pairs for LINC00696
- Browse CRISPR knockouts for LINC00696
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC00696
- GenScript: Custom all cDNA clones Services for LINC00696
- GenScript Custom Purified and Recombinant Proteins Services for LINC00696
- GenScript Custom Assay Services for LINC00696
- GenScript Custom overexpressing Cell Line Services for LINC00696
- Browse GenScript CRISPR for LINC00696
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for LINC00696
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse Sino Biological ELISA Kits
- Browse Sino Biological ELISA Pair Sets
- Browse Sino Biological CRO Services
- Browse Sino Biological Control Vectors
- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies at Cloud-Clone Corp.
- Browse Proteins at Cloud-Clone Corp.
- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for LINC00696
- VectorBuilder custom plasmid, inducible vectors for LINC00696
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LINC00696
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- antibodies-online: Search results for available LINC00696 related products ranked by validation data
- antibodies-online: Search results for available LINC00696 related products ranked by validation data
- antibodies-online: Search results for available LINC00696 related products ranked by validation data
- Search GeneTex for Antibodies for LINC00696
- Search GeneTex for Proteins for LINC00696
- genomics-online: cdna clones - Search results for available LINC00696 gene related products
- orf clones - Search results for available LINC00696 gene related products
- genomics-online: gRNA clones - Search results for available LINC00696 gene related products
- genomics-online: primer clones - Search results for available LINC00696 gene related products
- genomics-online: shRNA clones - Search results for available LINC00696 gene related products
Sources for LINC00696 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew