Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LINC00687 Gene

Subcategory (RNA class) for LINC00687 Gene


Quality Score for this RNA gene is


Aliases for LINC00687 Gene

  • Long Intergenic Non-Protein Coding RNA 687 2 3
  • Chromosome 20 Open Reading Frame 61 2
  • DJ1012F16.1 3
  • C20orf61 3

External Ids for LINC00687 Gene

Previous HGNC Symbols for LINC00687 Gene

  • C20orf61

Summaries for LINC00687 Gene

GeneCards Summary for LINC00687 Gene

LINC00687 (Long Intergenic Non-Protein Coding RNA 687) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00687 Gene

Genomics for LINC00687 Gene

Genomic Location for LINC00687 Gene

11,800,463 bp from pter
11,872,015 bp from pter
71,553 bases
Minus strand

Genomic View for LINC00687 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC00687 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00687 Gene

No data available for Regulatory Elements for LINC00687 Gene

Proteins for LINC00687 Gene

Post-translational modifications for LINC00687 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00687 Gene

Domains for LINC00687 Gene

Gene Families for LINC00687 Gene

  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC00687: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC00687 Gene

Function for LINC00687 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LINC00687 Gene

Localization for LINC00687 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC00687 Gene

Pathways for LINC00687 Gene

SuperPathways for LINC00687 Gene

No Data Available

Interacting Proteins for LINC00687 Gene

Gene Ontology (GO) - Biological Process for LINC00687 Gene


No data available for Pathways by source for LINC00687 Gene

Transcripts for LINC00687 Gene

mRNA/cDNA for LINC00687 Gene

(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LINC00687 Gene

Long intergenic non-protein coding RNA 687:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC00687
    • Block miRNA regulation of LINC00687 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for LINC00687

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for LINC00687 Gene

    No ASD Table

    Relevant External Links for LINC00687 Gene

    GeneLoc Exon Structure for
    ECgene alternative splicing isoforms for

    Expression for LINC00687 Gene

    mRNA expression in normal human tissues for LINC00687 Gene

    mRNA differential expression in normal tissues according to GTEx for LINC00687 Gene

    This gene is overexpressed in Testis (52.8).

    SOURCE GeneReport for Unigene cluster for LINC00687 Gene Hs.560990

    genes like me logo Genes that share expressions with LINC00687: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for LINC00687 Gene

    Orthologs for LINC00687 Gene

    Evolution for LINC00687 Gene

    Gene Tree for LINC00687 (if available)
    Gene Tree for LINC00687 (if available)

    No data available for Orthologs for LINC00687 Gene

    Paralogs for LINC00687 Gene

    No data available for Paralogs for LINC00687 Gene

    Variants for LINC00687 Gene

    Sequence variations from dbSNP and Humsavar for LINC00687 Gene

    SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
    rs743007 -- 11,827,967(+) ttgtt(A/G)tagaa intron-variant
    rs743008 -- 11,827,903(+) ctcag(A/C)cttca intron-variant
    rs803657 -- 11,813,855(-) ctgct(A/G)taaca intron-variant
    rs803658 -- 11,813,703(-) ttctg(A/G)tggtt intron-variant
    rs803659 -- 11,813,366(-) AAGGA(C/T)CTATA intron-variant

    Relevant External Links for LINC00687 Gene

    HapMap Linkage Disequilibrium report

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for LINC00687 Gene

    Disorders for LINC00687 Gene

    No disorders were found for LINC00687 Gene.

    No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for LINC00687 Gene

    Publications for LINC00687 Gene

    1. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P. … Rogers J. (Nature 2001) 3
    2. Transcriptomic and genetic studies identify IL-33 as a candidate gene for Alzheimer's disease. (PMID: 19204726) Chapuis J. … Lambert J.C. (Mol. Psychiatry 2009) 3

    Products for LINC00687 Gene

    Sources for LINC00687 Gene

    Back to Top