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Aliases for LINC00652 Gene

Subcategory (RNA class) for LINC00652 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LINC00652 Gene

  • Long Intergenic Non-Protein Coding RNA 652 2 3 5
  • HSPC072 3

External Ids for LINC00652 Gene

Summaries for LINC00652 Gene

GeneCards Summary for LINC00652 Gene

LINC00652 (Long Intergenic Non-Protein Coding RNA 652) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00652 Gene

Genomics for LINC00652 Gene

Regulatory Elements for LINC00652 Gene

Enhancers for LINC00652 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around LINC00652 on UCSC Golden Path with GeneCards custom track

Promoters for LINC00652 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around LINC00652 on UCSC Golden Path with GeneCards custom track

Genomic Location for LINC00652 Gene

18,786,065 bp from pter
18,794,584 bp from pter
8,520 bases
Minus strand

Genomic View for LINC00652 Gene

Genes around LINC00652 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC00652 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC00652 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00652 Gene

Proteins for LINC00652 Gene

Post-translational modifications for LINC00652 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00652 Gene

Domains & Families for LINC00652 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC00652 Gene

Function for LINC00652 Gene

genes like me logo Genes that share phenotypes with LINC00652: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00652 Gene

Localization for LINC00652 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC00652 Gene

Pathways & Interactions for LINC00652 Gene

SuperPathways for LINC00652 Gene

No Data Available

Interacting Proteins for LINC00652 Gene

Gene Ontology (GO) - Biological Process for LINC00652 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC00652 Gene

Drugs & Compounds for LINC00652 Gene

No Compound Related Data Available

Transcripts for LINC00652 Gene

mRNA/cDNA for LINC00652 Gene

(1) REFSEQ mRNAs :
(8) Additional mRNA sequences :
(23) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LINC00652 Gene

Long intergenic non-protein coding RNA 652:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00652 Gene

No ASD Table

Relevant External Links for LINC00652 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC00652 Gene

mRNA expression in normal human tissues for LINC00652 Gene

SOURCE GeneReport for Unigene cluster for LINC00652 Gene Hs.584899

genes like me logo Genes that share expression patterns with LINC00652: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for LINC00652 Gene

Orthologs for LINC00652 Gene

Evolution for LINC00652 Gene

Gene Tree for LINC00652 (if available)
Gene Tree for LINC00652 (if available)

No data available for Orthologs for LINC00652 Gene

Paralogs for LINC00652 Gene

No data available for Paralogs for LINC00652 Gene

Variants for LINC00652 Gene

Sequence variations from dbSNP and Humsavar for LINC00652 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
rs859031 -- 18,792,027(-) CACAA(A/G)AGGGC intron-variant
rs859032 -- 18,790,679(-) TTATG(C/G)GGGAC intron-variant
rs859033 -- 18,788,958(-) atcca(C/G)ctctt intron-variant
rs6045613 -- 18,791,152(+) TTCAT(C/G)TAACT intron-variant
rs6081374 -- 18,788,072(+) catct(A/T)atgtg nc-transcript-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LINC00652 Gene

Disorders for LINC00652 Gene

Relevant External Links for LINC00652

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for LINC00652 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC00652 Gene

Publications for LINC00652 Gene

  1. Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells. (PMID: 11042152) Zhang Q.-H. … Chen Z. (Genome Res. 2000) 2 3 67
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for LINC00652 Gene

Sources for LINC00652 Gene