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Aliases for LINC00652 Gene

Subcategory (RNA class) for LINC00652 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for LINC00652 Gene

  • Long Intergenic Non-Protein Coding RNA 652 2 3
  • HSPC072 3

External Ids for LINC00652 Gene

ORGUL Members for LINC00652 Gene

Summaries for LINC00652 Gene

GeneCards Summary for LINC00652 Gene

LINC00652 (Long Intergenic Non-Protein Coding RNA 652) is a RNA Gene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00652 Gene

Genomics for LINC00652 Gene

Genomic Location for LINC00652 Gene

Start:
18,786,065 bp from pter
End:
18,794,584 bp from pter
Size:
8,520 bases
Orientation:
Minus strand

Genomic View for LINC00652 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC00652 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00652 Gene

No data available for Regulatory Elements for LINC00652 Gene

Proteins for LINC00652 Gene

Post-translational modifications for LINC00652 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00652 Gene

Domains for LINC00652 Gene

Gene Families for LINC00652 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with LINC00652: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for LINC00652 Gene

Function for LINC00652 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LINC00652 Gene

Localization for LINC00652 Gene

No data available for Gene Ontology (GO) - Cellular Components for LINC00652 Gene

Pathways for LINC00652 Gene

SuperPathways for LINC00652 Gene

No Data Available

Interacting Proteins for LINC00652 Gene

Gene Ontology (GO) - Biological Process for LINC00652 Gene

None

No data available for Pathways by source for LINC00652 Gene

Transcripts for LINC00652 Gene

mRNA/cDNA for LINC00652 Gene

Unigene Clusters for LINC00652 Gene

Long intergenic non-protein coding RNA 652:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00652 Gene

No ASD Table

Relevant External Links for LINC00652 Gene

GeneLoc Exon Structure for
LINC00652
ECgene alternative splicing isoforms for
LINC00652

Expression for LINC00652 Gene

mRNA expression in normal human tissues for LINC00652 Gene

SOURCE GeneReport for Unigene cluster for LINC00652 Gene Hs.584899

genes like me logo Genes that share expressions with LINC00652: view

Orthologs for LINC00652 Gene

Evolution for LINC00652 Gene

ENSEMBL:
Gene Tree for LINC00652 (if available)
TreeFam:
Gene Tree for LINC00652 (if available)

No data available for Orthologs for LINC00652 Gene

Paralogs for LINC00652 Gene

No data available for Paralogs for LINC00652 Gene

Variants for LINC00652 Gene

Sequence variations from dbSNP and Humsavar for LINC00652 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs859031 -- 18,792,027(-) CACAA(A/G)AGGGC intron-variant
rs859032 -- 18,790,679(-) TTATG(C/G)GGGAC intron-variant
rs859033 -- 18,788,958(-) atcca(C/G)ctctt intron-variant
rs6045613 -- 18,791,152(+) TTCAT(C/G)TAACT intron-variant
rs6081374 -- 18,788,072(+) catct(A/T)atgtg nc-transcript-variant

Relevant External Links for LINC00652 Gene

HapMap Linkage Disequilibrium report
LINC00652

No data available for Structural Variations from Database of Genomic Variants (DGV) for LINC00652 Gene

Disorders for LINC00652 Gene

No disorders were found for LINC00652 Gene.

No data available for UniProtKB/Swiss-Prot for LINC00652 Gene

Publications for LINC00652 Gene

  1. Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells. (PMID: 11042152) Zhang Q.-H. … Chen Z. (Genome Res. 2000) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for LINC00652 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate LINC00652
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for LINC00652
    • Block miRNA regulation of LINC00652 using miScript Target Protectors

    Sources for LINC00652 Gene

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