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Aliases for LINC00615 Gene

Subcategory (RNA class) for LINC00615 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for LINC00615 Gene

  • Long Intergenic Non-Protein Coding RNA 615 2 3
  • C12orf37 3 4
  • Chromosome 12 Open Reading Frame 37 2

External Ids for LINC00615 Gene

ORGUL Members for LINC00615 Gene

Previous Symbols for LINC00615 Gene

  • C12orf37

Summaries for LINC00615 Gene

GeneCards Summary for LINC00615 Gene

LINC00615 (Long Intergenic Non-Protein Coding RNA 615) is an RNA Gene, and belongs to the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00615 Gene

Genomics for LINC00615 Gene

Genomic Location for LINC00615 Gene

Start:
90,918,023 bp from pter
End:
90,948,669 bp from pter
Size:
30,647 bases
Orientation:
Plus strand

Genomic View for LINC00615 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for LINC00615 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00615 Gene

No data available for Regulatory Elements for LINC00615 Gene

Proteins for LINC00615 Gene

  • Protein details for LINC00615 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96LM1-CL037_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by LINC00615
    Protein Accession:
    Q96LM1
    Secondary Accessions:

    Protein attributes for LINC00615 Gene

    Size:
    132 amino acids
    Molecular mass:
    14531 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LINC00615 Gene

Proteomics data for LINC00615 Gene at MOPED

Post-translational modifications for LINC00615 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00615 Gene

Domains for LINC00615 Gene

Gene Families for LINC00615 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for LINC00615 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC00615: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC00615 Gene

Function for LINC00615 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for LINC00615 Gene

Localization for LINC00615 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LINC00615 Gene

Pathways for LINC00615 Gene

SuperPathways for LINC00615 Gene

No Data Available

Interacting Proteins for LINC00615 Gene

Gene Ontology (GO) - Biological Process for LINC00615 Gene

None

No data available for Pathways by source for LINC00615 Gene

Transcripts for LINC00615 Gene

mRNA/cDNA for LINC00615 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LINC00615 Gene

Long intergenic non-protein coding RNA 615:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00615 Gene

No ASD Table

Relevant External Links for LINC00615 Gene

GeneLoc Exon Structure for
LINC00615
ECgene alternative splicing isoforms for
LINC00615

Expression for LINC00615 Gene

mRNA expression in normal human tissues for LINC00615 Gene

mRNA differential expression in normal tissues according to GTEx for LINC00615 Gene

This gene is overexpressed in Testis (44.7).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for LINC00615 Gene

SOURCE GeneReport for Unigene cluster for LINC00615 Gene Hs.350600

genes like me logo Genes that share expressions with LINC00615: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for LINC00615 Gene

Orthologs for LINC00615 Gene

Evolution for LINC00615 Gene

ENSEMBL:
Gene Tree for LINC00615 (if available)
TreeFam:
Gene Tree for LINC00615 (if available)

No data available for Orthologs for LINC00615 Gene

Paralogs for LINC00615 Gene

No data available for Paralogs for LINC00615 Gene

Variants for LINC00615 Gene

Sequence variations from dbSNP and Humsavar for LINC00615 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs1920722 -- 90,944,688(+) CATAC(A/T)CTCAT intron-variant
rs2408417 -- 90,946,779(+) TTTTT(A/T)AAATT intron-variant
rs4264211 -- 90,935,977(+) gatcc(A/C)ttgct intron-variant
rs4360756 -- 90,940,828(+) CTAAC(A/G)TTTTT intron-variant
rs4427619 -- 90,925,493(+) GGTTC(A/G)AACTA intron-variant

Relevant External Links for LINC00615 Gene

HapMap Linkage Disequilibrium report
LINC00615

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for LINC00615 Gene

Disorders for LINC00615 Gene

No disorders were found for LINC00615 Gene.

No data available for UniProtKB/Swiss-Prot for LINC00615 Gene

Publications for LINC00615 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4
  2. The finished DNA sequence of human chromosome 12. (PMID: 16541075) Scherer S.E. … Gibbs R.A. (Nature 2006) 4

Products for LINC00615 Gene

Sources for LINC00615 Gene

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