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Aliases for LINC00612 Gene

Subcategory (RNA class) for LINC00612 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LINC00612 Gene

  • Long Intergenic Non-Protein Coding RNA 612 2 3 5
  • C12orf33 3 4
  • Chromosome 12 Open Reading Frame 33 2

External Ids for LINC00612 Gene

Previous HGNC Symbols for LINC00612 Gene

  • C12orf33

Previous GeneCards Identifiers for LINC00612 Gene

  • GC12M009209

Summaries for LINC00612 Gene

GeneCards Summary for LINC00612 Gene

LINC00612 (Long Intergenic Non-Protein Coding RNA 612) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC00612 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC00612 Gene

Genomics for LINC00612 Gene

Regulatory Elements for LINC00612 Gene

Enhancers for LINC00612 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H008947 1.7 FANTOM5 ENCODE dbSUPER 20.6 +112.9 112857 8.7 ARID4B SIN3A FEZF1 DMAP1 YBX1 ZNF2 YY1 ZNF207 ZNF143 DEK M6PR KLRG1 LINC00612 PHC1 LOC642846 DDX12P ENSG00000257105
GH12H008617 1.4 FANTOM5 Ensembl ENCODE 12.8 +446.2 446177 2.7 PKNOX1 JUN BMI1 CEBPG BATF FOSL1 GTF3C2 ATF7 RUNX3 IKZF2 CLEC4E LOC642846 DDX12P M6PR LINC00612 ENSG00000255753 A2ML1-AS2 A2ML1 CLEC6A CLEC4A
GH12H008079 1.4 ENCODE dbSUPER 10 +983.4 983438 3.7 HDGF PKNOX1 ARID4B SIN3A FEZF1 DMAP1 YBX1 ZNF2 YY1 ZNF766 FOXJ2 POU5F1P3 HADHAP2 M6PR ENSG00000256967 LINC00612 NECAP1 ENSG00000279865
GH12H008179 0.9 ENCODE 10 +884.9 884900 1.1 HDGF RB1 ZNF76 KLF17 SIN3A GLI4 ZNF2 GLIS2 ZNF143 KLF7 CLEC4A FAM66C LINC00612 ZNF705A
GH12H009346 0.8 ENCODE 11 -282.3 -282313 1.5 ATF1 NFRKB ZNF766 ZBTB11 USF2 CEBPB HDAC8 MEF2D TFDP1 ZNF589 LOC642846 ENSG00000214776 LINC00612 LINC02367 PIR53453 PIR49219 GC12P009675
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LINC00612 on UCSC Golden Path with GeneCards custom track

Promoters for LINC00612 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000048582 270 1601 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 GLIS2 PAF1 SP5 REST

Genomic Locations for LINC00612 Gene

Genomic Locations for LINC00612 Gene
9,485 bases
Minus strand

Genomic View for LINC00612 Gene

Genes around LINC00612 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC00612 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC00612 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00612 Gene

Proteins for LINC00612 Gene

  • Protein details for LINC00612 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein encoded by LINC00612
    Protein Accession:
    Secondary Accessions:
    • B3KW01

    Protein attributes for LINC00612 Gene

    182 amino acids
    Molecular mass:
    18370 Da
    Quaternary structure:
    No Data Available

neXtProt entry for LINC00612 Gene

Post-translational modifications for LINC00612 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00612 Gene

Domains & Families for LINC00612 Gene

Protein Domains for LINC00612 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with LINC00612: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC00612 Gene

Function for LINC00612 Gene

Phenotypes for LINC00612 Gene

GenomeRNAi human phenotypes for LINC00612:
genes like me logo Genes that share phenotypes with LINC00612: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00612 Gene

Localization for LINC00612 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC00612 Gene

Pathways & Interactions for LINC00612 Gene

SuperPathways for LINC00612 Gene

No Data Available

Interacting Proteins for LINC00612 Gene

Selected Interacting proteins: Q8N6U2-CL033_HUMAN for LINC00612 Gene via UniProtKB

Gene Ontology (GO) - Biological Process for LINC00612 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC00612 Gene

Drugs & Compounds for LINC00612 Gene

No Compound Related Data Available

Transcripts for LINC00612 Gene

mRNA/cDNA for LINC00612 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LINC00612 Gene

Long intergenic non-protein coding RNA 612:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00612 Gene

No ASD Table

Relevant External Links for LINC00612 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC00612 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC00612 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC00612 Gene:


SOURCE GeneReport for Unigene cluster for LINC00612 Gene:

genes like me logo Genes that share expression patterns with LINC00612: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC00612 Gene

Orthologs for LINC00612 Gene

Evolution for LINC00612 Gene

Gene Tree for LINC00612 (if available)
Gene Tree for LINC00612 (if available)

No data available for Orthologs for LINC00612 Gene

Paralogs for LINC00612 Gene

No data available for Paralogs for LINC00612 Gene

Variants for LINC00612 Gene

Sequence variations from dbSNP and Humsavar for LINC00612 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1000212841 -- 9,066,247(+) AGCTC(C/T)GGCCC intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1000476709 -- 9,066,387(+) AAGCT(C/G)TTTGT intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1000787335 -- 9,060,274(+) ACCTT(A/G)GCCTC intron-variant
rs1000922028 -- 9,062,912(+) TAACG(G/T)CTTAG intron-variant
rs1000974055 -- 9,062,637(+) ATACA(A/T)ATACA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for LINC00612 Gene

Variant ID Type Subtype PubMed ID
nsv1051530 CNV gain 25217958
nsv832327 CNV loss 17160897

Relevant External Links for LINC00612 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC00612 Gene

Disorders for LINC00612 Gene

Relevant External Links for LINC00612

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for LINC00612 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC00612 Gene

Publications for LINC00612 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 60
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 60
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 4 60

Products for LINC00612 Gene

Sources for LINC00612 Gene

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